RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 RTN4RL1Q86UN2 441 aaPredicted RBP6.58□□□□□ -1.36
LINC00535-202ENST00000517785 FTSJ3Q8IY81 847 aaKnown RBP6.58□□□□□ -1.36
LINC00535-202ENST00000517785 LMBR1Q8WVP7 490 aa6.58□□□□□ -1.36
LINC00535-202ENST00000517785 ZBTB10Q96DT7 871 aa6.58□□□□□ -1.36
LINC00535-202ENST00000517785 KIF1BPQ96EK5 621 aa6.58□□□□□ -1.36
LINC00535-202ENST00000517785 SEC62Q99442 399 aaKnown RBP6.58□□□□□ -1.36
LINC00535-202ENST00000517785 CDCA3Q99618 268 aaPredicted RBP6.58□□□□□ -1.36
LINC00535-202ENST00000517785 TCF25Q9BQ70 676 aa6.58□□□□□ -1.36
LINC00535-202ENST00000517785 RTP3Q9BQQ7 232 aa6.58□□□□□ -1.36
LINC00535-202ENST00000517785 TUT1Q9H6E5 874 aaKnown RBP6.58□□□□□ -1.36
LINC00535-202ENST00000517785 AGO3Q9H9G7 860 aaKnown RBP6.58□□□□□ -1.36
LINC00535-202ENST00000517785 ENTPD7Q9NQZ7 604 aa6.58□□□□□ -1.36
LINC00535-202ENST00000517785 NCDNQ9UBB6 729 aa6.58□□□□□ -1.36
LINC00535-202ENST00000517785 SETXQ7Z333 2677 aaKnown RBP6.57□□□□□ -1.36
LINC00535-202ENST00000517785 WDR19Q8NEZ3 1342 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 TBKBP1A7MCY6 615 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 PROCP04070 461 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 DCNP07585 359 aaKnown RBP6.57□□□□□ -1.36
LINC00535-202ENST00000517785 SLC3A2P08195 630 aaKnown RBP6.57□□□□□ -1.36
LINC00535-202ENST00000517785 ADRB1P08588 477 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 SP9P0CG40 484 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 PDHBP11177 359 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 PBX3P40426 434 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 SNRPNP63162 240 aaKnown RBP6.57□□□□□ -1.36
LINC00535-202ENST00000517785 MGAT3Q09327 533 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 TMEM62Q0P6H9 643 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 KCNC3Q14003 757 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 LBRQ14739 615 aaKnown RBP6.57□□□□□ -1.36
LINC00535-202ENST00000517785 CDC37Q16543 378 aaPredicted RBP6.57□□□□□ -1.36
LINC00535-202ENST00000517785 C4orf17Q53FE4 359 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 HSP90AB4PQ58FF6 505 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 RRP12Q5JTH9 1297 aaKnown RBP6.57□□□□□ -1.36
LINC00535-202ENST00000517785 FBXO47Q5MNV8 452 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 CES5AQ6NT32 575 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 C1orf229Q6ZS94 237 aaPredicted RBP6.57□□□□□ -1.36
LINC00535-202ENST00000517785 NPAS4Q8IUM7 802 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 COLGALT1Q8NBJ5 622 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 SUMF1Q8NBK3 374 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 IL31RAQ8NI17 732 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 APPBP2Q92624 585 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 TMEM47Q9BQJ4 181 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 UBA5Q9GZZ9 404 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 NAPBQ9H115 298 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 SEMA4AQ9H3S1 761 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 EHMT1Q9H9B1 1298 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 MLXIPQ9HAP2 919 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 PXMP2Q9NR77 195 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 SH2B1Q9NRF2 756 aaPredicted RBP6.57□□□□□ -1.36
LINC00535-202ENST00000517785 TOMM22Q9NS69 142 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 DBR1Q9UK59 544 aaKnown RBP6.57□□□□□ -1.36
LINC00535-202ENST00000517785 LRFN2Q9ULH4 789 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 CA14Q9ULX7 337 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.57□□□□□ -1.36
LINC00535-202ENST00000517785 PCDHB12Q9Y5F1 795 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 CDY2AQ9Y6F7 541 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 SDK1Q7Z5N4 2213 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 C2orf16Q68DN1 1984 aa6.57□□□□□ -1.36
LINC00535-202ENST00000517785 FLNBO75369 2602 aaKnown RBP6.56□□□□□ -1.36
LINC00535-202ENST00000517785 DENND4AQ7Z401 1863 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 KRBA1A5PL33 1030 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 SHISA8B8ZZ34 492 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 PATL2C9JE40 543 aaKnown RBP6.56□□□□□ -1.36
LINC00535-202ENST00000517785 NOP56O00567 594 aaKnown RBP6.56□□□□□ -1.36
LINC00535-202ENST00000517785 RNF113AO15541 343 aaKnown RBP6.56□□□□□ -1.36
LINC00535-202ENST00000517785 SMARCA5O60264 1052 aaPredicted RBP6.56□□□□□ -1.36
LINC00535-202ENST00000517785 ADAM23O75077 832 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 EIF3JO75822 258 aaKnown RBP6.56□□□□□ -1.36
LINC00535-202ENST00000517785 CFBP00751 764 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 SCG2P13521 617 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 ZNF543Q08ER8 600 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 TSGA10IPQ3SY00 556 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 TPRNQ4KMQ1 711 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 PPM1JQ5JR12 505 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 TMEM214Q6NUQ4 689 aaKnown RBP6.56□□□□□ -1.36
LINC00535-202ENST00000517785 ZC3H14Q6PJT7 736 aaKnown RBP6.56□□□□□ -1.36
LINC00535-202ENST00000517785 TMEM184AQ6ZMB5 413 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 TSHZ1Q6ZSZ6 1077 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 GALNT6Q8NCL4 622 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 DNAJB3Q8WWF6 145 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 CASP10Q92851 521 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 NECTIN4Q96NY8 510 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 IWS1Q96ST2 819 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 NACAP1Q9BZK3 213 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 FAM49AQ9H0Q0 323 aaPredicted RBP6.56□□□□□ -1.36
LINC00535-202ENST00000517785 ADAM7Q9H2U9 754 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 RUBCNLQ9H714 662 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 USP18Q9UMW8 372 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 HCFC2Q9Y5Z7 792 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 MIA3Q5JRA6 1907 aa6.56□□□□□ -1.36
LINC00535-202ENST00000517785 BAZ2BQ9UIF8 2168 aaKnown RBP6.55□□□□□ -1.36
LINC00535-202ENST00000517785 ABCB11O95342 1321 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 FSD2A1L4K1 749 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 KINO60870 393 aaKnown RBP6.55□□□□□ -1.36
LINC00535-202ENST00000517785 EOMESO95936 686 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 STAG3L1P0CL83 205 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 TOP1P11387 765 aaKnown RBP6.55□□□□□ -1.36
LINC00535-202ENST00000517785 GNAT1P11488 350 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 HOXB8P17481 243 aaPredicted RBP6.55□□□□□ -1.36
LINC00535-202ENST00000517785 GNAT2P19087 354 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 MARK3P27448 753 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms