RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 VPS52Q8N1B4 723 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 ZNF710Q8N1W2 664 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 CCDC148Q8NFR7 591 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 EVPLQ92817 2033 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 LPPQ93052 612 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 LENG9Q96B70 501 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 JAKMIP1Q96N16 626 aaKnown RBP17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 TEKT3Q9BXF9 490 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 SLC26A6Q9BXS9 759 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 UNC45AQ9H3U1 944 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 SMOC2Q9H3U7 446 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 VPS54Q9P1Q0 977 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 SORCS3Q9UPU3 1222 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 INPP5FQ9Y2H2 1132 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 TMEM150BA6NC51 233 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 PRPF3O43395 683 aaKnown RBP17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 BRD1O95696 1058 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 EOMESO95936 686 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 ASGR2P07307 311 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 CIITAP33076 1130 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 MTHFRP42898 656 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 JAK3P52333 1124 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 DRP2Q13474 957 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 TSGA10IPQ3SY00 556 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 TWF2Q6IBS0 349 aaKnown RBP17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 KANK3Q6NY19 840 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 TDRD5Q8NAT2 981 aaKnown RBP17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 SH2D3AQ9BRG2 576 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 GCOM2Q9BZD3 368 aaPredicted RBP17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 GBP3Q9H0R5 595 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 IRF2BPLQ9H1B7 796 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 DBR1Q9UK59 544 aaKnown RBP17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 PIN4Q9Y237 131 aaKnown RBP17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 KMT2EQ8IZD2 1858 aa17.16■□□□□ 0.34
CSGALNACT1-204ENST00000517494 CDC45O75419 566 aa17.15■□□□□ 0.34
CSGALNACT1-204ENST00000517494 EPCAMP16422 314 aa17.15■□□□□ 0.34
CSGALNACT1-204ENST00000517494 SFPQP23246 707 aaKnown RBP eCLIP17.15■□□□□ 0.34
CSGALNACT1-204ENST00000517494 SFNP31947 248 aa17.15■□□□□ 0.34
CSGALNACT1-204ENST00000517494 RNASELQ05823 741 aaKnown RBP17.15■□□□□ 0.34
CSGALNACT1-204ENST00000517494 MIER3Q7Z3K6 550 aa17.15■□□□□ 0.34
CSGALNACT1-204ENST00000517494 ZNF598Q86UK7 904 aaKnown RBP17.15■□□□□ 0.34
CSGALNACT1-204ENST00000517494 TMEM173Q86WV6 379 aaPredicted RBP17.15■□□□□ 0.34
CSGALNACT1-204ENST00000517494 UBALD2Q8IYN6 164 aa17.15■□□□□ 0.34
CSGALNACT1-204ENST00000517494 MFSD1Q9H3U5 465 aa17.15■□□□□ 0.34
CSGALNACT1-204ENST00000517494 A0A087WZ62 844 aa17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 GALR2O43603 387 aaPredicted RBP17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 PHKA2P46019 1235 aa17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 DNM2P50570 870 aa17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 NLRP5P59047 1200 aa17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 ATAT1Q5SQI0 421 aa17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 BLOC1S2Q6QNY1 142 aa17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 GLB1LQ6UWU2 654 aa17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 RIT2Q99578 217 aa17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 FDXACB1Q9BRP7 624 aaPredicted RBP17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 ZBP1Q9H171 429 aa17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 DZANK1Q9NVP4 752 aa17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 LIMD1Q9UGP4 676 aa17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 USP34Q70CQ2 3546 aa17.14■□□□□ 0.33
CSGALNACT1-204ENST00000517494 CCT2P78371 535 aaKnown RBP17.13■□□□□ 0.33
CSGALNACT1-204ENST00000517494 TMC5Q6UXY8 1006 aa17.13■□□□□ 0.33
CSGALNACT1-204ENST00000517494 CABP7Q86V35 215 aa17.13■□□□□ 0.33
CSGALNACT1-204ENST00000517494 RHPN2Q8IUC4 686 aa17.13■□□□□ 0.33
CSGALNACT1-204ENST00000517494 TMEM105Q8N8V8 129 aa17.13■□□□□ 0.33
CSGALNACT1-204ENST00000517494 SLC5A5Q92911 643 aa17.13■□□□□ 0.33
CSGALNACT1-204ENST00000517494 SNX27Q96L92 541 aa17.13■□□□□ 0.33
CSGALNACT1-204ENST00000517494 NLRP4Q96MN2 994 aa17.13■□□□□ 0.33
CSGALNACT1-204ENST00000517494 SUCLA2Q9P2R7 463 aaPredicted RBP17.13■□□□□ 0.33
CSGALNACT1-204ENST00000517494 DDX11L8A8MPP1 907 aa17.12■□□□□ 0.33
CSGALNACT1-204ENST00000517494 SSBP05455 408 aaKnown RBP eCLIP17.12■□□□□ 0.33
CSGALNACT1-204ENST00000517494 XKR3Q5GH77 459 aa17.12■□□□□ 0.33
CSGALNACT1-204ENST00000517494 NOMO2Q5JPE7 1267 aa17.12■□□□□ 0.33
CSGALNACT1-204ENST00000517494 KIAA1841Q6NSI8 718 aa17.12■□□□□ 0.33
CSGALNACT1-204ENST00000517494 CATSPER4Q7RTX7 472 aa17.12■□□□□ 0.33
CSGALNACT1-204ENST00000517494 TBCKQ8TEA7 893 aa17.12■□□□□ 0.33
CSGALNACT1-204ENST00000517494 IGSF21Q96ID5 467 aa17.12■□□□□ 0.33
CSGALNACT1-204ENST00000517494 RNF26Q9BY78 433 aaPredicted RBP17.12■□□□□ 0.33
CSGALNACT1-204ENST00000517494 NCOA5Q9HCD5 579 aaKnown RBP17.12■□□□□ 0.33
CSGALNACT1-204ENST00000517494 CHST12Q9NRB3 414 aa17.12■□□□□ 0.33
CSGALNACT1-204ENST00000517494 TBC1D13Q9NVG8 400 aa17.12■□□□□ 0.33
CSGALNACT1-204ENST00000517494 MYH9P35579 1960 aaKnown RBP17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 MEIS3P2A8K0S8 358 aa17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 TDP2O95551 362 aa17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 CTSAP10619 480 aa17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 SKIP12755 728 aa17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 USP11P51784 963 aa17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 CDC42EP1Q00587 391 aa17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 TARBP2Q15633 366 aaKnown RBP17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 DDX53Q86TM3 631 aaKnown RBP17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 KSR1Q8IVT5 923 aa17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 BCL7CQ8WUZ0 217 aaPredicted RBP17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 INO80BQ9C086 356 aaPredicted RBP17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 NRDE2Q9H7Z3 1164 aa17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 FAM105AQ9NUU6 356 aa17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 DNAJB4Q9UDY4 337 aa17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 SNX14Q9Y5W7 946 aa17.11■□□□□ 0.33
CSGALNACT1-204ENST00000517494 ZFHX2Q9C0A1 2572 aaPredicted RBP17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 EDIL3O43854 480 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 PSMD10O75832 226 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 GALTP07902 379 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 SLC11A1P49279 550 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms