RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 TCP11Q8WWU5 503 aa17.54■□□□□ 0.4
SERF1B-208ENST00000515588 CLP1Q92989 425 aaKnown RBP17.54■□□□□ 0.4
SERF1B-208ENST00000515588 INTS4Q96HW7 963 aaKnown RBP17.54■□□□□ 0.4
SERF1B-208ENST00000515588 SAMD11Q96NU1 681 aa17.54■□□□□ 0.4
SERF1B-208ENST00000515588 NACC1Q96RE7 527 aa17.54■□□□□ 0.4
SERF1B-208ENST00000515588 MINDY3Q9H8M7 445 aa17.54■□□□□ 0.4
SERF1B-208ENST00000515588 ATP6V0A4Q9HBG4 840 aa17.54■□□□□ 0.4
SERF1B-208ENST00000515588 PRDM6Q9NQX0 595 aa17.54■□□□□ 0.4
SERF1B-208ENST00000515588 LRWD1Q9UFC0 647 aa17.54■□□□□ 0.4
SERF1B-208ENST00000515588 DBR1Q9UK59 544 aaKnown RBP17.54■□□□□ 0.4
SERF1B-208ENST00000515588 MRPL42Q9Y6G3 142 aaKnown RBP17.54■□□□□ 0.4
SERF1B-208ENST00000515588 LAD1O00515 517 aa17.53■□□□□ 0.4
SERF1B-208ENST00000515588 GTPBP6O43824 516 aaPredicted RBP17.53■□□□□ 0.4
SERF1B-208ENST00000515588 USO1O60763 962 aaKnown RBP17.53■□□□□ 0.4
SERF1B-208ENST00000515588 ZSCAN20P17040 1043 aaPredicted RBP17.53■□□□□ 0.4
SERF1B-208ENST00000515588 SFPQP23246 707 aaKnown RBP eCLIP17.53■□□□□ 0.4
SERF1B-208ENST00000515588 CDC25AP30304 524 aa17.53■□□□□ 0.4
SERF1B-208ENST00000515588 ARL2P36404 184 aa17.53■□□□□ 0.4
SERF1B-208ENST00000515588 CCT6AP40227 531 aaKnown RBP17.53■□□□□ 0.4
SERF1B-208ENST00000515588 CMTR2Q8IYT2 770 aaKnown RBP17.53■□□□□ 0.4
SERF1B-208ENST00000515588 RNF149Q8NC42 400 aa17.53■□□□□ 0.4
SERF1B-208ENST00000515588 SNX21Q969T3 373 aa17.53■□□□□ 0.4
SERF1B-208ENST00000515588 ELAC1Q9H777 363 aaKnown RBP17.53■□□□□ 0.4
SERF1B-208ENST00000515588 FOXD4L1Q9NU39 408 aa17.53■□□□□ 0.4
SERF1B-208ENST00000515588 RNF19AQ9NV58 838 aa17.53■□□□□ 0.4
SERF1B-208ENST00000515588 TMEM161AQ9NX61 479 aa17.53■□□□□ 0.4
SERF1B-208ENST00000515588 VPS37CA5D8V6 355 aaPredicted RBP17.52■□□□□ 0.4
SERF1B-208ENST00000515588 H3BNC9 293 aa17.52■□□□□ 0.4
SERF1B-208ENST00000515588 ASAP2O43150 1006 aa17.52■□□□□ 0.4
SERF1B-208ENST00000515588 FGFR1P11362 822 aa17.52■□□□□ 0.4
SERF1B-208ENST00000515588 GLRA2P23416 452 aa17.52■□□□□ 0.4
SERF1B-208ENST00000515588 BMPR1AP36894 532 aa17.52■□□□□ 0.4
SERF1B-208ENST00000515588 HAUS3Q68CZ6 603 aa17.52■□□□□ 0.4
SERF1B-208ENST00000515588 DTHD1Q6ZMT9 781 aa17.52■□□□□ 0.4
SERF1B-208ENST00000515588 ECHDC2Q86YB7 292 aa17.52■□□□□ 0.4
SERF1B-208ENST00000515588 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.52■□□□□ 0.4
SERF1B-208ENST00000515588 CCDC43Q96MW1 224 aaKnown RBP17.52■□□□□ 0.4
SERF1B-208ENST00000515588 MMTAG2Q9BU76 263 aaKnown RBP17.52■□□□□ 0.4
SERF1B-208ENST00000515588 INO80BQ9C086 356 aaPredicted RBP17.52■□□□□ 0.4
SERF1B-208ENST00000515588 GPRC5CQ9NQ84 441 aa17.52■□□□□ 0.4
SERF1B-208ENST00000515588 CHST12Q9NRB3 414 aa17.52■□□□□ 0.4
SERF1B-208ENST00000515588 A0A0U1RQF3 1178 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 TBKBP1A7MCY6 615 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 C5orf67F2Z3F1 127 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 ATF7P17544 494 aaPredicted RBP17.51■□□□□ 0.39
SERF1B-208ENST00000515588 PDCP20941 246 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 SYT1P21579 422 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 MUTP22033 750 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 CTNNB1P35222 781 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 PTENP60484 403 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 GPM6BQ13491 265 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 CAPSQ13938 189 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 MXD4Q14582 209 aaPredicted RBP17.51■□□□□ 0.39
SERF1B-208ENST00000515588 MAEAQ7L5Y9 396 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 CATSPER4Q7RTX7 472 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 BRAPQ7Z569 592 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 SRGAP1Q7Z6B7 1085 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 ZNF598Q86UK7 904 aaKnown RBP17.51■□□□□ 0.39
SERF1B-208ENST00000515588 SNX29Q8TEQ0 813 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 POLR3FQ9H1D9 316 aaPredicted RBP17.51■□□□□ 0.39
SERF1B-208ENST00000515588 LMCD1Q9NZU5 365 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 HCSTQ9UBK5 93 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 KIAA1024Q9UPX6 916 aa17.51■□□□□ 0.39
SERF1B-208ENST00000515588 PIN4Q9Y237 131 aaKnown RBP17.51■□□□□ 0.39
SERF1B-208ENST00000515588 HOXA11P31270 313 aaPredicted RBP17.5■□□□□ 0.39
SERF1B-208ENST00000515588 PADI6Q6TGC4 694 aa17.5■□□□□ 0.39
SERF1B-208ENST00000515588 CASD1Q96PB1 797 aa17.5■□□□□ 0.39
SERF1B-208ENST00000515588 TRAIPQ9BWF2 469 aa17.5■□□□□ 0.39
SERF1B-208ENST00000515588 RAB34Q9BZG1 259 aa17.5■□□□□ 0.39
SERF1B-208ENST00000515588 AGPAT5Q9NUQ2 364 aa17.5■□□□□ 0.39
SERF1B-208ENST00000515588 DDX19AQ9NUU7 478 aaKnown RBP17.5■□□□□ 0.39
SERF1B-208ENST00000515588 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
SERF1B-208ENST00000515588 DACT1Q9NYF0 836 aa17.5■□□□□ 0.39
SERF1B-208ENST00000515588 NLRC5Q86WI3 1866 aa17.5■□□□□ 0.39
SERF1B-208ENST00000515588 MYO7AQ13402 2215 aa17.49■□□□□ 0.39
SERF1B-208ENST00000515588 ARHGEF35A5YM69 484 aa17.49■□□□□ 0.39
SERF1B-208ENST00000515588 VWA3AA6NCI4 1184 aa17.49■□□□□ 0.39
SERF1B-208ENST00000515588 RB1P06400 928 aa17.49■□□□□ 0.39
SERF1B-208ENST00000515588 CYP11B2P19099 503 aa17.49■□□□□ 0.39
SERF1B-208ENST00000515588 PHKA2P46019 1235 aa17.49■□□□□ 0.39
SERF1B-208ENST00000515588 RESTQ13127 1097 aa17.49■□□□□ 0.39
SERF1B-208ENST00000515588 CLLU1OSQ5K130 101 aa17.49■□□□□ 0.39
SERF1B-208ENST00000515588 TWF2Q6IBS0 349 aaKnown RBP17.49■□□□□ 0.39
SERF1B-208ENST00000515588 KCNK18Q7Z418 384 aa17.49■□□□□ 0.39
SERF1B-208ENST00000515588 IFNLR1Q8IU57 520 aaPredicted RBP17.49■□□□□ 0.39
SERF1B-208ENST00000515588 RNF169Q8NCN4 708 aa17.49■□□□□ 0.39
SERF1B-208ENST00000515588 BHMT2Q9H2M3 363 aa17.49■□□□□ 0.39
SERF1B-208ENST00000515588 RWDD3Q9Y3V2 267 aa17.49■□□□□ 0.39
SERF1B-208ENST00000515588 FNDC1Q4ZHG4 1894 aaPredicted RBP17.49■□□□□ 0.39
SERF1B-208ENST00000515588 RALGAPA2Q2PPJ7 1873 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 GRM6O15303 877 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 EOMESO95936 686 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 MBTD1Q05BQ5 628 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 POU5F1BQ06416 359 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 KRT79Q5XKE5 535 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 ARL6IP4Q66PJ3 421 aaKnown RBP17.48■□□□□ 0.39
SERF1B-208ENST00000515588 LRRC55Q6ZSA7 311 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 MCPH1Q8NEM0 835 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 BSNDQ8WZ55 320 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 MRPL38Q96DV4 380 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms