RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 CDC42EP1Q00587 391 aa20.71■□□□□ 0.91
SPOP-220ENST00000515508 SMC1AQ14683 1233 aaKnown RBP20.71■□□□□ 0.91
SPOP-220ENST00000515508 PTPN21Q16825 1174 aa20.71■□□□□ 0.91
SPOP-220ENST00000515508 XKR3Q5GH77 459 aa20.71■□□□□ 0.91
SPOP-220ENST00000515508 LLGL2Q6P1M3 1020 aa20.71■□□□□ 0.91
SPOP-220ENST00000515508 MIER3Q7Z3K6 550 aa20.71■□□□□ 0.91
SPOP-220ENST00000515508 SUGP1Q8IWZ8 645 aaKnown RBP20.71■□□□□ 0.91
SPOP-220ENST00000515508 MRPL43Q8N983 215 aaKnown RBP20.71■□□□□ 0.91
SPOP-220ENST00000515508 CASP10Q92851 521 aa20.71■□□□□ 0.91
SPOP-220ENST00000515508 ASIC4Q96FT7 647 aa20.71■□□□□ 0.91
SPOP-220ENST00000515508 PRRX2Q99811 253 aa20.71■□□□□ 0.91
SPOP-220ENST00000515508 CHST12Q9NRB3 414 aa20.71■□□□□ 0.91
SPOP-220ENST00000515508 SEPT9Q9UHD8 586 aaPredicted RBP20.71■□□□□ 0.91
SPOP-220ENST00000515508 PCDHA4Q9UN74 947 aa20.71■□□□□ 0.91
SPOP-220ENST00000515508 HCFC2Q9Y5Z7 792 aa20.71■□□□□ 0.91
SPOP-220ENST00000515508 USP34Q70CQ2 3546 aa20.71■□□□□ 0.91
SPOP-220ENST00000515508 C2orf71A6NGG8 1288 aa20.7■□□□□ 0.9
SPOP-220ENST00000515508 M0R2N6 131 aa20.7■□□□□ 0.9
SPOP-220ENST00000515508 NLRP5P59047 1200 aa20.7■□□□□ 0.9
SPOP-220ENST00000515508 IER5LQ5T953 404 aa20.7■□□□□ 0.9
SPOP-220ENST00000515508 MOXD1Q6UVY6 613 aa20.7■□□□□ 0.9
SPOP-220ENST00000515508 MBOAT7Q96N66 472 aa20.7■□□□□ 0.9
SPOP-220ENST00000515508 GCOM2Q9BZD3 368 aaPredicted RBP20.7■□□□□ 0.9
SPOP-220ENST00000515508 TMEM150BA6NC51 233 aa20.69■□□□□ 0.9
SPOP-220ENST00000515508 CSDE1O75534 798 aaKnown RBP20.69■□□□□ 0.9
SPOP-220ENST00000515508 TDP2O95551 362 aa20.69■□□□□ 0.9
SPOP-220ENST00000515508 SFPQP23246 707 aaKnown RBP eCLIP20.69■□□□□ 0.9
SPOP-220ENST00000515508 PHKA2P46019 1235 aa20.69■□□□□ 0.9
SPOP-220ENST00000515508 PTPN5P54829 565 aa20.69■□□□□ 0.9
SPOP-220ENST00000515508 TOB2Q14106 344 aaPredicted RBP20.69■□□□□ 0.9
SPOP-220ENST00000515508 MTERF2Q49AM1 385 aa20.69■□□□□ 0.9
SPOP-220ENST00000515508 TPRNQ4KMQ1 711 aa20.69■□□□□ 0.9
SPOP-220ENST00000515508 ZNF410Q86VK4 478 aa20.69■□□□□ 0.9
SPOP-220ENST00000515508 TRIM22Q8IYM9 498 aa20.69■□□□□ 0.9
SPOP-220ENST00000515508 DAGLBQ8NCG7 672 aa20.69■□□□□ 0.9
SPOP-220ENST00000515508 ETNPPLQ8TBG4 499 aa20.69■□□□□ 0.9
SPOP-220ENST00000515508 APOL5Q9BWW9 433 aa20.69■□□□□ 0.9
SPOP-220ENST00000515508 REC8O95072 547 aa20.68■□□□□ 0.9
SPOP-220ENST00000515508 ALDH7A1P49419 539 aaKnown RBP20.68■□□□□ 0.9
SPOP-220ENST00000515508 BCAR1P56945 870 aa20.68■□□□□ 0.9
SPOP-220ENST00000515508 ITIH3Q06033 890 aa20.68■□□□□ 0.9
SPOP-220ENST00000515508 NPY5RQ15761 445 aa20.68■□□□□ 0.9
SPOP-220ENST00000515508 RUFY3Q7L099 469 aa20.68■□□□□ 0.9
SPOP-220ENST00000515508 FAM177A1Q8N128 213 aaPredicted RBP20.68■□□□□ 0.9
SPOP-220ENST00000515508 ZBP1Q9H171 429 aa20.68■□□□□ 0.9
SPOP-220ENST00000515508 NR2E1Q9Y466 385 aa20.68■□□□□ 0.9
SPOP-220ENST00000515508 DENND4AQ7Z401 1863 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 A0A087WZ62 844 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 CARNS1A5YM72 827 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 MAFO75444 373 aaPredicted RBP20.67■□□□□ 0.9
SPOP-220ENST00000515508 DEXIO95424 95 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 DNM2P50570 870 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 SSRP1Q08945 709 aaKnown RBP20.67■□□□□ 0.9
SPOP-220ENST00000515508 BLIDQ8IZY5 108 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 TMEM169Q96HH4 297 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 NECTIN4Q96NY8 510 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 SH2D3AQ9BRG2 576 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 FDXACB1Q9BRP7 624 aaPredicted RBP20.67■□□□□ 0.9
SPOP-220ENST00000515508 INO80BQ9C086 356 aaPredicted RBP20.67■□□□□ 0.9
SPOP-220ENST00000515508 ADAM7Q9H2U9 754 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 ZSWIM6Q9HCJ5 1215 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 CDH22Q9UJ99 828 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 IRAK3Q9Y616 596 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 CACNA1HO95180 2353 aa20.67■□□□□ 0.9
SPOP-220ENST00000515508 NT5C1B-RDH14C9J2C7 533 aa20.66■□□□□ 0.9
SPOP-220ENST00000515508 EPB41L2O43491 1005 aaKnown RBP20.66■□□□□ 0.9
SPOP-220ENST00000515508 CLASP2O75122 1294 aaKnown RBP20.66■□□□□ 0.9
SPOP-220ENST00000515508 ZC3H11AO75152 810 aaKnown RBP eCLIP20.66■□□□□ 0.9
SPOP-220ENST00000515508 SKIP12755 728 aa20.66■□□□□ 0.9
SPOP-220ENST00000515508 TCF15Q12870 199 aa20.66■□□□□ 0.9
SPOP-220ENST00000515508 TWF2Q6IBS0 349 aaKnown RBP20.66■□□□□ 0.9
SPOP-220ENST00000515508 GALNT17Q6IS24 598 aa20.66■□□□□ 0.9
SPOP-220ENST00000515508 CES5AQ6NT32 575 aa20.66■□□□□ 0.9
SPOP-220ENST00000515508 ANO5Q75V66 913 aa20.66■□□□□ 0.9
SPOP-220ENST00000515508 TMEM173Q86WV6 379 aaPredicted RBP20.66■□□□□ 0.9
SPOP-220ENST00000515508 PHOX2BQ99453 314 aa20.66■□□□□ 0.9
SPOP-220ENST00000515508 POMKQ9H5K3 350 aa20.66■□□□□ 0.9
SPOP-220ENST00000515508 PIN4Q9Y237 131 aaKnown RBP20.66■□□□□ 0.9
SPOP-220ENST00000515508 ZNF623O75123 536 aa20.65■□□□□ 0.9
SPOP-220ENST00000515508 SP100P23497 879 aaPredicted RBP20.65■□□□□ 0.9
SPOP-220ENST00000515508 RAB27AP51159 221 aa20.65■□□□□ 0.9
SPOP-220ENST00000515508 POLGP54098 1239 aaPredicted RBP20.65■□□□□ 0.9
SPOP-220ENST00000515508 VCPP55072 806 aaKnown RBP20.65■□□□□ 0.9
SPOP-220ENST00000515508 BMS1Q14692 1282 aaKnown RBP20.65■□□□□ 0.9
SPOP-220ENST00000515508 RHPN2Q8IUC4 686 aa20.65■□□□□ 0.9
SPOP-220ENST00000515508 VPS52Q8N1B4 723 aa20.65■□□□□ 0.9
SPOP-220ENST00000515508 LPPQ93052 612 aa20.65■□□□□ 0.9
SPOP-220ENST00000515508 ZNF274Q96GC6 653 aaPredicted RBP20.65■□□□□ 0.9
SPOP-220ENST00000515508 JPH2Q9BR39 696 aaPredicted RBP20.65■□□□□ 0.9
SPOP-220ENST00000515508 FAM105AQ9NUU6 356 aa20.65■□□□□ 0.9
SPOP-220ENST00000515508 TBC1D13Q9NVG8 400 aa20.65■□□□□ 0.9
SPOP-220ENST00000515508 SUCLA2Q9P2R7 463 aaPredicted RBP20.65■□□□□ 0.9
SPOP-220ENST00000515508 ARID2Q68CP9 1835 aa20.64■□□□□ 0.9
SPOP-220ENST00000515508 MEIS3P2A8K0S8 358 aa20.64■□□□□ 0.89
SPOP-220ENST00000515508 C2CD4DB7Z1M9 353 aa20.64■□□□□ 0.89
SPOP-220ENST00000515508 PSMC5P62195 406 aa20.64■□□□□ 0.89
SPOP-220ENST00000515508 GIT2Q14161 759 aa20.64■□□□□ 0.89
SPOP-220ENST00000515508 NONOQ15233 471 aaKnown RBP eCLIP20.64■□□□□ 0.89
SPOP-220ENST00000515508 GLB1LQ6UWU2 654 aa20.64■□□□□ 0.89
SPOP-220ENST00000515508 DDX53Q86TM3 631 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms