RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 MKRN4PQ13434 485 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-213ENST00000515418 IQSEC1Q6DN90 963 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 HS2ST1Q7LGA3 356 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 TRIM59Q8IWR1 403 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 ZNF784Q8NCA9 323 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-213ENST00000515418 CCDC150Q8NCX0 1101 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 PPTC7Q8NI37 304 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 ATP8B4Q8TF62 1192 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 BBXQ8WY36 941 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-213ENST00000515418 ZNF668Q96K58 619 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-213ENST00000515418 CBWD1Q9BRT8 395 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 CRACR2AQ9BSW2 395 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 TBX20Q9UMR3 447 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 GABRQQ9UN88 632 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 TRPC6Q9Y210 931 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 KAT6AQ92794 2004 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 TTC26A0AVF1 554 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 AKR1B15C9JRZ8 316 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-213ENST00000515418 RBAK-RBAKDNI3L0D1 243 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 TULP1O00294 542 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-213ENST00000515418 MAFO75444 373 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-213ENST00000515418 GNA14O95837 355 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 GJB1P08034 283 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 HOXC6P09630 235 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 ZNF865P0CJ78 1059 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-213ENST00000515418 ARL2P36404 184 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 APBA1Q02410 837 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 NOGQ13253 232 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 OLFML2BQ68BL8 750 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 TAS1R3Q7RTX0 852 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 OR6J1Q8NGC5 347 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 SPIRE2Q8WWL2 714 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 PRPF31Q8WWY3 499 aaKnown RBP10.04□□□□□ -0.8
CPNE4-213ENST00000515418 IFT74Q96LB3 600 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 DMAC2Q9NW81 257 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 ARMCX3Q9UH62 379 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-213ENST00000515418 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.04□□□□□ -0.8
CPNE4-213ENST00000515418 MGAMO43451 1857 aa10.04□□□□□ -0.8
CPNE4-213ENST00000515418 ITIH6Q6UXX5 1313 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 EMSYQ7Z589 1322 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 A0A1W2PQC6 194 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 GOLGA8IPA6NC78 632 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 LRRIQ4A6NIV6 560 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 GOLGA8JA6NMD2 632 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 EPHB6O15197 1021 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 PPFIA4O75335 1185 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 TRPA1O75762 1119 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 ADSSP30520 456 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 RFC5P40937 340 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 RGS2P41220 211 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 MARSP56192 900 aaKnown RBP10.03□□□□□ -0.8
CPNE4-213ENST00000515418 KCNH2Q12809 1159 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 FKBP15Q5T1M5 1219 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 TCERG1LQ5VWI1 586 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 FRMD5Q7Z6J6 570 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 TMEM139Q8IV31 216 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 EMID1Q96A84 441 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-213ENST00000515418 BORCS6Q96GS4 357 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 FAM167AQ96KS9 214 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 C16orf70Q9BSU1 422 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 TMX1Q9H3N1 280 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 ST6GALNAC4Q9H4F1 302 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 TMEM206Q9H813 350 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 MMRN2Q9H8L6 949 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 C17orf75Q9HAS0 396 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 FAM207AQ9NSI2 230 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-213ENST00000515418 AGPAT5Q9NUQ2 364 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 ERAP1Q9NZ08 941 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.03□□□□□ -0.8
CPNE4-213ENST00000515418 UBE4BO95155 1302 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 USP27XA6NNY8 438 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 ZNF500O60304 480 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-213ENST00000515418 EXOC3O60645 756 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 SRGAP2CP0DJJ0 459 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 INSRRP14616 1297 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 YY1P25490 414 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 CNGA1P29973 690 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 PSMC2P35998 433 aaKnown RBP10.03□□□□□ -0.8
CPNE4-213ENST00000515418 RTP1P59025 263 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 LACTBP83111 547 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-213ENST00000515418 KCNMA1Q12791 1236 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 NOLC1Q14978 699 aaKnown RBP eCLIP10.03□□□□□ -0.8
CPNE4-213ENST00000515418 DCAF17Q5H9S7 520 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-213ENST00000515418 SLC39A4Q6P5W5 647 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 FAM186BQ8IYM0 893 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 MSL3Q8N5Y2 521 aaKnown RBP10.03□□□□□ -0.8
CPNE4-213ENST00000515418 METTL13Q8N6R0 699 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 ERGIC2Q96RQ1 377 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 TRMT1Q9NXH9 659 aaKnown RBP10.03□□□□□ -0.8
CPNE4-213ENST00000515418 SIK3Q9Y2K2 1263 aa10.03□□□□□ -0.8
CPNE4-213ENST00000515418 H3BRB1 525 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 HBP1O60381 514 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 MFAP3LO75121 409 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 MMP3P08254 477 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 EPB41P11171 864 aaKnown RBP10.02□□□□□ -0.81
CPNE4-213ENST00000515418 TRIM21P19474 475 aaKnown RBP10.02□□□□□ -0.81
CPNE4-213ENST00000515418 KRT9P35527 623 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 FLT3LGP49771 235 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 SLC26A2P50443 739 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 APLP1P51693 650 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms