RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 ZNF410Q86VK4 478 aa14.58□□□□□ -0.08
CDK7-213ENST00000515391 C4orf32Q8N8J7 132 aa14.58□□□□□ -0.08
CDK7-213ENST00000515391 JPH2Q9BR39 696 aaPredicted RBP14.58□□□□□ -0.08
CDK7-213ENST00000515391 MINDY3Q9H8M7 445 aa14.58□□□□□ -0.08
CDK7-213ENST00000515391 IFT122Q9HBG6 1241 aa14.58□□□□□ -0.08
CDK7-213ENST00000515391 NOL7Q9UMY1 257 aaKnown RBP14.58□□□□□ -0.08
CDK7-213ENST00000515391 EYSQ5T1H1 3165 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 ATG2AQ2TAZ0 1938 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 TCF20Q9UGU0 1960 aaKnown RBP14.57□□□□□ -0.08
CDK7-213ENST00000515391 DNAJB1P25685 340 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 CDC42EP1Q00587 391 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 PTPROQ16827 1216 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 SPOUT1Q5T280 376 aaKnown RBP14.57□□□□□ -0.08
CDK7-213ENST00000515391 MAEAQ7L5Y9 396 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 CATSPER4Q7RTX7 472 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 CATSPER3Q86XQ3 398 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 KLHL23Q8NBE8 558 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 NEK9Q8TD19 979 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 PSPC1Q8WXF1 523 aaKnown RBP14.57□□□□□ -0.08
CDK7-213ENST00000515391 HLA-CQ95604 372 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 MTRQ99707 1265 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 C11orf84Q9BUA3 381 aaPredicted RBP14.57□□□□□ -0.08
CDK7-213ENST00000515391 BACH2Q9BYV9 841 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 ELAC1Q9H777 363 aaKnown RBP14.57□□□□□ -0.08
CDK7-213ENST00000515391 ANKEF1Q9NU02 776 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 TYW1Q9NV66 732 aaKnown RBP14.57□□□□□ -0.08
CDK7-213ENST00000515391 PLAGL2Q9UPG8 496 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 RWDD3Q9Y3V2 267 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 PPME1Q9Y570 386 aa14.57□□□□□ -0.08
CDK7-213ENST00000515391 MYO7AQ13402 2215 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 USO1O60763 962 aaKnown RBP14.56□□□□□ -0.08
CDK7-213ENST00000515391 ITGB1P05556 798 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 ATF7P17544 494 aaPredicted RBP14.56□□□□□ -0.08
CDK7-213ENST00000515391 SFPQP23246 707 aaKnown RBP eCLIP14.56□□□□□ -0.08
CDK7-213ENST00000515391 TRAPPC10P48553 1259 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 MCM2P49736 904 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 RARRES1P49788 294 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 PTGDRQ13258 359 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 CAMK1Q14012 370 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 TCEAL5Q5H9L2 206 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 CLLU1OSQ5K130 101 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 POTEGQ6S5H5 508 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 LRRC55Q6ZSA7 311 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 FERMT3Q86UX7 667 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 EXOC8Q8IYI6 725 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 RNF149Q8NC42 400 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 SPPL3Q8TCT6 385 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 ASAP3Q8TDY4 903 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 TCP11Q8WWU5 503 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 LPPQ93052 612 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 CASD1Q96PB1 797 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 SMC3Q9UQE7 1217 aa14.56□□□□□ -0.08
CDK7-213ENST00000515391 PIN4Q9Y237 131 aaKnown RBP14.56□□□□□ -0.08
CDK7-213ENST00000515391 A0A0U1RQF3 1178 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 MEIS3P2A8K0S8 358 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 ORC2Q13416 577 aaPredicted RBP14.55□□□□□ -0.08
CDK7-213ENST00000515391 ECM1Q16610 540 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 TWF2Q6IBS0 349 aaKnown RBP14.55□□□□□ -0.08
CDK7-213ENST00000515391 FAM43BQ6ZT52 329 aaPredicted RBP14.55□□□□□ -0.08
CDK7-213ENST00000515391 ZNF598Q86UK7 904 aaKnown RBP14.55□□□□□ -0.08
CDK7-213ENST00000515391 HELQQ8TDG4 1101 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 CCDC43Q96MW1 224 aaKnown RBP14.55□□□□□ -0.08
CDK7-213ENST00000515391 NECAB3Q96P71 396 aaPredicted RBP14.55□□□□□ -0.08
CDK7-213ENST00000515391 PLVAPQ9BX97 442 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 INO80BQ9C086 356 aaPredicted RBP14.55□□□□□ -0.08
CDK7-213ENST00000515391 TMEM117Q9H0C3 514 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 CWH43Q9H720 699 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 TUFT1Q9NNX1 390 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 GPRC5CQ9NQ84 441 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 CHST12Q9NRB3 414 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 COG5Q9UP83 839 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 KIF3AQ9Y496 699 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 PCDHGC5Q9Y5F6 944 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 PRUNE2Q8WUY3 3088 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 PLXNA4Q9HCM2 1894 aa14.55□□□□□ -0.08
CDK7-213ENST00000515391 H3BQV1 296 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 DGAT1O75907 488 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 BMP1P13497 986 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 GTF2F1P35269 517 aaKnown RBP eCLIP14.54□□□□□ -0.08
CDK7-213ENST00000515391 IRS1P35568 1242 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 ARL2P36404 184 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 PBX3P40426 434 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 PHKA2P46019 1235 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 IL17AQ16552 155 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 TIGD5Q53EQ6 642 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 EP400NLQ6ZTU2 488 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 SRGAP1Q7Z6B7 1085 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 COLGALT1Q8NBJ5 622 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 ADAMTS19Q8TE59 1207 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 POF1BQ8WVV4 589 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 SYMPKQ92797 1274 aaKnown RBP14.54□□□□□ -0.08
CDK7-213ENST00000515391 P2RX5Q93086 422 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 POLR3CQ9BUI4 534 aaPredicted RBP14.54□□□□□ -0.08
CDK7-213ENST00000515391 LMAN2LQ9H0V9 348 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 POLR3FQ9H1D9 316 aaPredicted RBP14.54□□□□□ -0.08
CDK7-213ENST00000515391 NSUN3Q9H649 340 aaKnown RBP14.54□□□□□ -0.08
CDK7-213ENST00000515391 UBE2ZQ9H832 354 aaPredicted RBP14.54□□□□□ -0.08
CDK7-213ENST00000515391 POLD4Q9HCU8 107 aa14.54□□□□□ -0.08
CDK7-213ENST00000515391 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.54□□□□□ -0.08
CDK7-213ENST00000515391 AGPAT5Q9NUQ2 364 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms