RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 KRTAP4-9Q9BYQ8 210 aa7□□□□□ -1.29
CAST-243ENST00000515160 PTPRHQ9HD43 1115 aa7□□□□□ -1.29
CAST-243ENST00000515160 ERVK13-1Q9NX77 482 aa7□□□□□ -1.29
CAST-243ENST00000515160 MARCH2Q9P0N8 246 aa7□□□□□ -1.29
CAST-243ENST00000515160 GULP1Q9UBP9 304 aa7□□□□□ -1.29
CAST-243ENST00000515160 MSRAQ9UJ68 235 aa7□□□□□ -1.29
CAST-243ENST00000515160 DSEQ9UL01 958 aa7□□□□□ -1.29
CAST-243ENST00000515160 DNM3Q9UQ16 869 aa7□□□□□ -1.29
CAST-243ENST00000515160 PTPN22Q9Y2R2 807 aa7□□□□□ -1.29
CAST-243ENST00000515160 GPR45Q9Y5Y3 372 aa7□□□□□ -1.29
CAST-243ENST00000515160 SBNO1A3KN83 1393 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 C22orf46C9J442 243 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 PAX4O43316 350 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 NRDCO43847 1150 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 DGKIO75912 1065 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 RHCEP18577 417 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 SERPINB3P29508 390 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 CLCN7P51798 805 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 USP14P54578 494 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 OXCT1P55809 520 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 SRSF2Q01130 221 aaKnown RBP6.99□□□□□ -1.29
CAST-243ENST00000515160 RHDQ02161 417 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 TMEM132BQ14DG7 1078 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 INO80DQ53TQ3 878 aaPredicted RBP6.99□□□□□ -1.29
CAST-243ENST00000515160 TOR2AQ5JU69 321 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 FAM83BQ5T0W9 1011 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 ESRP1Q6NXG1 681 aaKnown RBP6.99□□□□□ -1.29
CAST-243ENST00000515160 TOGARAM2Q6ZUX3 1019 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 TMPRSS7Q7RTY8 843 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 TXNRD3Q86VQ6 643 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 TMEM52Q8NDY8 209 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 SH3RF2Q8TEC5 729 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 HPS3Q969F9 1004 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 FCRL2Q96LA5 508 aaPredicted RBP6.99□□□□□ -1.29
CAST-243ENST00000515160 FAM193BQ96PV7 902 aaPredicted RBP6.99□□□□□ -1.29
CAST-243ENST00000515160 FAM204AQ9H8W3 233 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 MKNK2Q9HBH9 465 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 KCNH7Q9NS40 1196 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 KLHL11Q9NVR0 708 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 USP36Q9P275 1121 aaKnown RBP6.99□□□□□ -1.29
CAST-243ENST00000515160 ATP23Q9Y6H3 246 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 X6R8D5 127 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 PPLO60437 1756 aa6.99□□□□□ -1.29
CAST-243ENST00000515160 PEAK1Q9H792 1746 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 NRXN1Q9ULB1 1477 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 RGPD3A6NKT7 1758 aaPredicted RBP6.98□□□□□ -1.29
CAST-243ENST00000515160 RGPD4Q7Z3J3 1758 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 FAM170BA6NMN3 283 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 KRIT1O00522 736 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 WDHD1O75717 1129 aaPredicted RBP6.98□□□□□ -1.29
CAST-243ENST00000515160 TCEA3O75764 348 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 C5AR1P21730 350 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 ENPP1P22413 925 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 TEKQ02763 1124 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 FSCN1Q16658 493 aaKnown RBP6.98□□□□□ -1.29
CAST-243ENST00000515160 ATAT1Q5SQI0 421 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 CREG2Q8IUH2 290 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 SPACA3Q8IXA5 215 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 PIP4K2CQ8TBX8 421 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 PARD3BQ8TEW8 1205 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 RTF1Q92541 710 aaKnown RBP6.98□□□□□ -1.29
CAST-243ENST00000515160 MAP3K14Q99558 947 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 MAF1Q9H063 256 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 SLC6A20Q9NP91 592 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 NLRC4Q9NPP4 1024 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 PLCB1Q9NQ66 1216 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 ZNF277Q9NRM2 450 aaPredicted RBP6.98□□□□□ -1.29
CAST-243ENST00000515160 GNL3LQ9NVN8 582 aaKnown RBP6.98□□□□□ -1.29
CAST-243ENST00000515160 NUB1Q9Y5A7 615 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 RRBP1Q9P2E9 1410 aaKnown RBP6.98□□□□□ -1.29
CAST-243ENST00000515160 KNDC1Q76NI1 1749 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 IFT172Q9UG01 1749 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 SPATA31A1Q5TZJ5 1347 aa6.98□□□□□ -1.29
CAST-243ENST00000515160 NUP155O75694 1391 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 KIF1BO60333 1816 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 HMX2A2RU54 273 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 TPP1O14773 563 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 ZBED1O96006 694 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 FGAP02671 866 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 FUCA1P04066 466 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 POU2F2P09086 479 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 MTNR1BP49286 362 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 AK2P54819 239 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 EGR3Q06889 387 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 EPHA7Q15375 998 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 UGT8Q16880 541 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 LILRA6Q6PI73 481 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 IFNL2Q8IZJ0 200 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 FBXL6Q8N531 539 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 ZBTB34Q8NCN2 500 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 VPS37AQ8NEZ2 397 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 UHMK1Q8TAS1 419 aaKnown RBP6.97□□□□□ -1.29
CAST-243ENST00000515160 ZNF496Q96IT1 587 aaPredicted RBP6.97□□□□□ -1.29
CAST-243ENST00000515160 ACO2Q99798 780 aaKnown RBP6.97□□□□□ -1.29
CAST-243ENST00000515160 SYT17Q9BSW7 474 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 KRTAP4-2Q9BYR5 136 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 GTPBP4Q9BZE4 634 aaKnown RBP6.97□□□□□ -1.29
CAST-243ENST00000515160 CD244Q9BZW8 370 aa6.97□□□□□ -1.29
CAST-243ENST00000515160 QRSL1Q9H0R6 528 aaKnown RBP6.97□□□□□ -1.29
CAST-243ENST00000515160 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms