RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 KCNN1Q92952 543 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 ERO1AQ96HE7 468 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 CEP89Q96ST8 783 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 XPNPEP1Q9NQW7 623 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 TAB2Q9NYJ8 693 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 TBX20Q9UMR3 447 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 FRMD4BQ9Y2L6 1034 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 A0A1W2PQC6 194 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 K7ERI5 159 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 SLC16A3O15427 465 aaKnown RBP17.56■□□□□ 0.4
NUP54-214ENST00000514307 TGFB1I1O43294 461 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 DUSP11O75319 330 aaKnown RBP17.56■□□□□ 0.4
NUP54-214ENST00000514307 MMP3P08254 477 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 EPB41P11171 864 aaKnown RBP17.56■□□□□ 0.4
NUP54-214ENST00000514307 PRMT2P55345 433 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 CDC42EP1Q00587 391 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 TFDP1Q14186 410 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 MAN2A1Q16706 1144 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 VWA3BQ502W6 1294 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 GJC2Q5T442 439 aaPredicted RBP17.56■□□□□ 0.4
NUP54-214ENST00000514307 LRRC55Q6ZSA7 311 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 TMEM161BQ8NDZ6 487 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 PSPC1Q8WXF1 523 aaKnown RBP17.56■□□□□ 0.4
NUP54-214ENST00000514307 TMEM143Q96AN5 459 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 IQCDQ96DY2 449 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 C16orf70Q9BSU1 422 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 MKNK1Q9BUB5 465 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 NUP58Q9BVL2 599 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 RNPEPQ9H4A4 650 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 SUGCTQ9HAC7 445 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 ARMCX3Q9UH62 379 aaPredicted RBP17.56■□□□□ 0.4
NUP54-214ENST00000514307 THSD7BQ9C0I4 1608 aa17.56■□□□□ 0.4
NUP54-214ENST00000514307 ZNFX1Q9P2E3 1918 aaKnown RBP17.55■□□□□ 0.4
NUP54-214ENST00000514307 IGKV6-21A0A0C4DH24 114 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 DENND3A2RUS2 1198 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 LGALS16A8MUM7 142 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 GPR25O00155 361 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 ZEB2O60315 1214 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 INSRRP14616 1297 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 CTGFP29279 349 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 TLK2Q86UE8 772 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 C12orf56Q8IXR9 622 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 CCDC150Q8NCX0 1101 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 PRPF31Q8WWY3 499 aaKnown RBP17.55■□□□□ 0.4
NUP54-214ENST00000514307 C2orf40Q9H1Z8 148 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 TMEM134Q9H6X4 195 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 DMAC2Q9NW81 257 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 SAGE1Q9NXZ1 904 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 SUCLA2Q9P2R7 463 aaPredicted RBP17.55■□□□□ 0.4
NUP54-214ENST00000514307 SRRDQ9UH36 339 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 GABRQQ9UN88 632 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 LCTP09848 1927 aa17.55■□□□□ 0.4
NUP54-214ENST00000514307 ZNF236Q9UL36 1845 aa17.54■□□□□ 0.4
NUP54-214ENST00000514307 CLIC2O15247 247 aa17.54■□□□□ 0.4
NUP54-214ENST00000514307 FKTNO75072 461 aa17.54■□□□□ 0.4
NUP54-214ENST00000514307 KLRC1P26715 233 aa17.54■□□□□ 0.4
NUP54-214ENST00000514307 PRKCZQ05513 592 aa17.54■□□□□ 0.4
NUP54-214ENST00000514307 TRIM14Q14142 442 aa17.54■□□□□ 0.4
NUP54-214ENST00000514307 SLFN12LQ6IEE8 588 aa17.54■□□□□ 0.4
NUP54-214ENST00000514307 EFCAB12Q6NXP0 572 aa17.54■□□□□ 0.4
NUP54-214ENST00000514307 TRIM50Q86XT4 487 aa17.54■□□□□ 0.4
NUP54-214ENST00000514307 ARHGAP39Q9C0H5 1083 aa17.54■□□□□ 0.4
NUP54-214ENST00000514307 NDST4Q9H3R1 872 aa17.54■□□□□ 0.4
NUP54-214ENST00000514307 AGPAT3Q9NRZ7 376 aa17.54■□□□□ 0.4
NUP54-214ENST00000514307 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.54■□□□□ 0.4
NUP54-214ENST00000514307 ITIH6Q6UXX5 1313 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 LRRIQ4A6NIV6 560 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 KIAA0391O15091 583 aaKnown RBP17.53■□□□□ 0.4
NUP54-214ENST00000514307 TEX33O43247 280 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 EXOC3O60645 756 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 GLRA2P23416 452 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 CNGA1P29973 690 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 POU5F1BQ06416 359 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 KCNA1Q09470 495 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 CEP135Q66GS9 1140 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 MAP4K3Q8IVH8 894 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 ZBTB8OSQ8IWT0 167 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 METTL13Q8N6R0 699 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 EEF2KMTQ96G04 330 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 BEGAINQ9BUH8 593 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 KATNAL1Q9BW62 490 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 KIAA1586Q9HCI6 787 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 ARHGAP28Q9P2N2 729 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 PLXNB2O15031 1838 aa17.53■□□□□ 0.4
NUP54-214ENST00000514307 ZBTB42B2RXF5 422 aa17.52■□□□□ 0.4
NUP54-214ENST00000514307 MAPK13O15264 365 aa17.52■□□□□ 0.4
NUP54-214ENST00000514307 SEPT4O43236 478 aa17.52■□□□□ 0.4
NUP54-214ENST00000514307 ADCY3O60266 1144 aa17.52■□□□□ 0.4
NUP54-214ENST00000514307 GNAT1P11488 350 aa17.52■□□□□ 0.4
NUP54-214ENST00000514307 KRT13P13646 458 aa17.52■□□□□ 0.4
NUP54-214ENST00000514307 SFPQP23246 707 aaKnown RBP eCLIP17.52■□□□□ 0.4
NUP54-214ENST00000514307 SOX10P56693 466 aa17.52■□□□□ 0.4
NUP54-214ENST00000514307 LAMTOR4Q0VGL1 99 aa17.52■□□□□ 0.4
NUP54-214ENST00000514307 PPFIA1Q13136 1202 aa17.52■□□□□ 0.4
NUP54-214ENST00000514307 TSR1Q2NL82 804 aaKnown RBP17.52■□□□□ 0.4
NUP54-214ENST00000514307 KSR1Q8IVT5 923 aa17.52■□□□□ 0.4
NUP54-214ENST00000514307 TRIM59Q8IWR1 403 aa17.52■□□□□ 0.4
NUP54-214ENST00000514307 ZNF710Q8N1W2 664 aa17.52■□□□□ 0.4
NUP54-214ENST00000514307 XXYLT1Q8NBI6 393 aa17.52■□□□□ 0.4
NUP54-214ENST00000514307 BSNDQ8WZ55 320 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms