RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 PARM1Q6UWI2 310 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 LONP2Q86WA8 852 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 TMEM57Q8N5G2 664 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 SAMD3Q8N6K7 520 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 GIMAP8Q8ND71 665 aaPredicted RBP13.65□□□□□ -0.22
SFXN1-210ENST00000513725 IGSF21Q96ID5 467 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 LOXL4Q96JB6 756 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 INPP4AQ96PE3 977 aaPredicted RBP13.65□□□□□ -0.22
SFXN1-210ENST00000513725 SENP7Q9BQF6 1050 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 SMARCAD1Q9H4L7 1026 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 STK39Q9UEW8 545 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 CHURC1-FNTBB4DL54 471 aa13.64□□□□□ -0.23
SFXN1-210ENST00000513725 SEC24BO95487 1268 aa13.64□□□□□ -0.23
SFXN1-210ENST00000513725 CEACAM1P13688 526 aa13.64□□□□□ -0.23
SFXN1-210ENST00000513725 HOXA13P31271 388 aaPredicted RBP13.64□□□□□ -0.23
SFXN1-210ENST00000513725 CXCL12P48061 93 aa13.64□□□□□ -0.23
SFXN1-210ENST00000513725 FNTBP49356 437 aa13.64□□□□□ -0.23
SFXN1-210ENST00000513725 CTDSPL2Q05D32 466 aa13.64□□□□□ -0.23
SFXN1-210ENST00000513725 QRICH1Q2TAL8 776 aa13.64□□□□□ -0.23
SFXN1-210ENST00000513725 DAB2IPQ5VWQ8 1189 aa13.64□□□□□ -0.23
SFXN1-210ENST00000513725 TMEM173Q86WV6 379 aaPredicted RBP13.64□□□□□ -0.23
SFXN1-210ENST00000513725 ADGRF4Q8IZF3 695 aa13.64□□□□□ -0.23
SFXN1-210ENST00000513725 FAM9BQ8IZU0 186 aa13.64□□□□□ -0.23
SFXN1-210ENST00000513725 RNF169Q8NCN4 708 aa13.64□□□□□ -0.23
SFXN1-210ENST00000513725 SEPT1Q8WYJ6 367 aa13.64□□□□□ -0.23
SFXN1-210ENST00000513725 FRAT1Q92837 279 aaPredicted RBP13.64□□□□□ -0.23
SFXN1-210ENST00000513725 HNRNPABQ99729 332 aaKnown RBP13.64□□□□□ -0.23
SFXN1-210ENST00000513725 TCP11L1Q9NUJ3 509 aa13.64□□□□□ -0.23
SFXN1-210ENST00000513725 M0R2C6 588 aa13.63□□□□□ -0.23
SFXN1-210ENST00000513725 RNF113AO15541 343 aaKnown RBP13.63□□□□□ -0.23
SFXN1-210ENST00000513725 DHX16O60231 1041 aaKnown RBP13.63□□□□□ -0.23
SFXN1-210ENST00000513725 ZC3H11AO75152 810 aaKnown RBP eCLIP13.63□□□□□ -0.23
SFXN1-210ENST00000513725 RFPL2O75678 378 aa13.63□□□□□ -0.23
SFXN1-210ENST00000513725 ZFYP08048 801 aaPredicted RBP13.63□□□□□ -0.23
SFXN1-210ENST00000513725 TROAPQ12815 778 aa13.63□□□□□ -0.23
SFXN1-210ENST00000513725 SEMA3FQ13275 785 aa13.63□□□□□ -0.23
SFXN1-210ENST00000513725 DSC3Q14574 896 aa13.63□□□□□ -0.23
SFXN1-210ENST00000513725 CLLU1OSQ5K130 101 aa13.63□□□□□ -0.23
SFXN1-210ENST00000513725 LARP1BQ659C4 914 aaKnown RBP13.63□□□□□ -0.23
SFXN1-210ENST00000513725 CEP85Q6P2H3 762 aa13.63□□□□□ -0.23
SFXN1-210ENST00000513725 TMEM40Q8WWA1 233 aa13.63□□□□□ -0.23
SFXN1-210ENST00000513725 TOMM22Q9NS69 142 aa13.63□□□□□ -0.23
SFXN1-210ENST00000513725 MYO18BQ8IUG5 2567 aa13.62□□□□□ -0.23
SFXN1-210ENST00000513725 OPLAHO14841 1288 aa13.62□□□□□ -0.23
SFXN1-210ENST00000513725 ORC4O43929 436 aa13.62□□□□□ -0.23
SFXN1-210ENST00000513725 ZSCAN20P17040 1043 aaPredicted RBP13.62□□□□□ -0.23
SFXN1-210ENST00000513725 KIAA1211LQ6NV74 962 aa13.62□□□□□ -0.23
SFXN1-210ENST00000513725 ECHDC2Q86YB7 292 aa13.62□□□□□ -0.23
SFXN1-210ENST00000513725 KBTBD3Q8NAB2 608 aa13.62□□□□□ -0.23
SFXN1-210ENST00000513725 HELQQ8TDG4 1101 aa13.62□□□□□ -0.23
SFXN1-210ENST00000513725 ZNF707Q96C28 371 aaPredicted RBP13.62□□□□□ -0.23
SFXN1-210ENST00000513725 TTC14Q96N46 770 aa13.62□□□□□ -0.23
SFXN1-210ENST00000513725 AMNQ9BXJ7 453 aa13.62□□□□□ -0.23
SFXN1-210ENST00000513725 CDHR5Q9HBB8 845 aa13.62□□□□□ -0.23
SFXN1-210ENST00000513725 MRPL17Q9NRX2 175 aaKnown RBP13.62□□□□□ -0.23
SFXN1-210ENST00000513725 RTEL1Q9NZ71 1219 aa13.62□□□□□ -0.23
SFXN1-210ENST00000513725 MYH6P13533 1939 aa13.62□□□□□ -0.23
SFXN1-210ENST00000513725 MAN2B1O00754 1011 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 HYAL3O43820 417 aaPredicted RBP13.61□□□□□ -0.23
SFXN1-210ENST00000513725 EPN2O95208 641 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 GLUD1P00367 558 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 SSBP05455 408 aaKnown RBP eCLIP13.61□□□□□ -0.23
SFXN1-210ENST00000513725 ADH1AP07327 375 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 PLA2G2AP14555 144 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 FSHRP23945 695 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 MRPS9P82933 396 aaKnown RBP13.61□□□□□ -0.23
SFXN1-210ENST00000513725 SATB1Q01826 763 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 PLCB4Q15147 1175 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 FAM228AQ86W67 206 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 FCHSD1Q86WN1 690 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 HDAC7Q8WUI4 952 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 MKNK1Q9BUB5 465 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 PHF20Q9BVI0 1012 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 NT5C3AQ9H0P0 336 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 CDH7Q9ULB5 785 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 NDRG2Q9UN36 371 aaKnown RBP13.61□□□□□ -0.23
SFXN1-210ENST00000513725 HECTD1Q9ULT8 2610 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 LAMA1P25391 3075 aa13.61□□□□□ -0.23
SFXN1-210ENST00000513725 USP9XQ93008 2570 aaPredicted RBP13.61□□□□□ -0.23
SFXN1-210ENST00000513725 GSTTP1A0A1W2PQM5 241 aa13.6□□□□□ -0.23
SFXN1-210ENST00000513725 GCOM1H8Y6P7 765 aaPredicted RBP13.6□□□□□ -0.23
SFXN1-210ENST00000513725 POLR2MP0CAP2 368 aa13.6□□□□□ -0.23
SFXN1-210ENST00000513725 MYBP10242 640 aa13.6□□□□□ -0.23
SFXN1-210ENST00000513725 CSRP1P21291 193 aaKnown RBP13.6□□□□□ -0.23
SFXN1-210ENST00000513725 RRP12Q5JTH9 1297 aaKnown RBP13.6□□□□□ -0.23
SFXN1-210ENST00000513725 PLA2G2CQ5R387 149 aa13.6□□□□□ -0.23
SFXN1-210ENST00000513725 TRMT2AQ8IZ69 625 aaKnown RBP13.6□□□□□ -0.23
SFXN1-210ENST00000513725 TRAPPC12Q8WVT3 735 aa13.6□□□□□ -0.23
SFXN1-210ENST00000513725 RSPH1Q8WYR4 309 aa13.6□□□□□ -0.23
SFXN1-210ENST00000513725 EDEM2Q9BV94 578 aa13.6□□□□□ -0.23
SFXN1-210ENST00000513725 ADAMTS10Q9H324 1103 aa13.6□□□□□ -0.23
SFXN1-210ENST00000513725 VAT1LQ9HCJ6 419 aa13.6□□□□□ -0.23
SFXN1-210ENST00000513725 VPS45Q9NRW7 570 aa13.6□□□□□ -0.23
SFXN1-210ENST00000513725 ZDHHC7Q9NXF8 308 aa13.6□□□□□ -0.23
SFXN1-210ENST00000513725 SSX2IPQ9Y2D8 614 aa13.6□□□□□ -0.23
SFXN1-210ENST00000513725 PCDHGA5Q9Y5G8 931 aa13.6□□□□□ -0.23
SFXN1-210ENST00000513725 C4orf47A7E2U8 309 aa13.59□□□□□ -0.23
SFXN1-210ENST00000513725 LILRB3O75022 631 aa13.59□□□□□ -0.23
SFXN1-210ENST00000513725 PAPLNO95428 1278 aa13.59□□□□□ -0.23
SFXN1-210ENST00000513725 GALTP07902 379 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms