RNA–Protein interactions for RNA: ENST00000513522.5

CCSER1-211, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 2

Gene CCSER1, Length 605 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-211ENST00000513522 NRSN2Q9GZP1 204 aa4.8□□□□□ -1.64
CCSER1-211ENST00000513522 PORCNQ9H237 461 aa4.8□□□□□ -1.64
CCSER1-211ENST00000513522 RANBP17Q9H2T7 1088 aaKnown RBP4.8□□□□□ -1.64
CCSER1-211ENST00000513522 RIOX1Q9H6W3 641 aa4.8□□□□□ -1.64
CCSER1-211ENST00000513522 JMJD4Q9H9V9 463 aa4.8□□□□□ -1.64
CCSER1-211ENST00000513522 UPF2Q9HAU5 1272 aaKnown RBP4.8□□□□□ -1.64
CCSER1-211ENST00000513522 SLC38A10Q9HBR0 1119 aa4.8□□□□□ -1.64
CCSER1-211ENST00000513522 RAVER2Q9HCJ3 691 aaKnown RBP4.8□□□□□ -1.64
CCSER1-211ENST00000513522 VAT1LQ9HCJ6 419 aa4.8□□□□□ -1.64
CCSER1-211ENST00000513522 ZNF214Q9UL59 606 aaPredicted RBP4.8□□□□□ -1.64
CCSER1-211ENST00000513522 RIPK3Q9Y572 518 aa4.8□□□□□ -1.64
CCSER1-211ENST00000513522 SNX11Q9Y5W9 270 aa4.8□□□□□ -1.64
CCSER1-211ENST00000513522 ADAMTS20P59510 1910 aa4.8□□□□□ -1.64
CCSER1-211ENST00000513522 NID2Q14112 1375 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 THSD7BQ9C0I4 1608 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 FOXN1O15353 648 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 JAK2O60674 1132 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 HSPA1AP0DMV8 641 aaKnown RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 HSPA1BP0DMV9 641 aaKnown RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 HSPA8P11142 646 aaKnown RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 FDPSP14324 419 aaKnown RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 METAP2P50579 478 aaKnown RBP eCLIP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 STAT2P52630 851 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 RCAN1P53805 252 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 ERVK-24P63145 666 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 IRX3P78415 501 aaPredicted RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 ARHGAP4P98171 946 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 FGD1P98174 961 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 GSTM4Q03013 218 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 CDK5R2Q13319 367 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 IKZF1Q13422 519 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 CDC37Q16543 378 aaPredicted RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 ASPRV1Q53RT3 343 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 GPATCH4Q5T3I0 446 aaKnown RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 CCDC174Q6PII3 467 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 CPXCR1Q8N123 301 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 ANKRD13CQ8N6S4 541 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 TMEM102Q8N9M5 508 aaPredicted RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 PRPF38AQ8NAV1 312 aaKnown RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 SMCR8Q8TEV9 937 aaPredicted RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 CHURC1Q8WUH1 139 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 PIBF1Q8WXW3 757 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 TBC1D5Q92609 795 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 PHKBQ93100 1093 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 GTF3C6Q969F1 213 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 NXPE3Q969Y0 559 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 ZNF274Q96GC6 653 aaPredicted RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 TMX3Q96JJ7 454 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 PIGSQ96S52 555 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 PARK7Q99497 189 aaKnown RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 MAP3K14Q99558 947 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 PAGR1Q9BTK6 254 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 MOV10L1Q9BXT6 1211 aaKnown RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 SPATC1LQ9H0A9 340 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 TNKS2Q9H2K2 1166 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 EPB41L4BQ9H329 900 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 ZFYVE28Q9HCC9 887 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 ZCCHC17Q9NP64 241 aaKnown RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 HOXC10Q9NYD6 342 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 KANSL3Q9P2N6 904 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 MORF4L1Q9UBU8 362 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 FEM1BQ9UK73 627 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 ISY1Q9ULR0 285 aaKnown RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 NAP1L2Q9ULW6 460 aaPredicted RBP4.79□□□□□ -1.64
CCSER1-211ENST00000513522 RABGAP1Q9Y3P9 1069 aa4.79□□□□□ -1.64
CCSER1-211ENST00000513522 MYPNQ86TC9 1320 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 HTTP42858 3142 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 H3BRB1 525 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 ATP2A1O14983 1001 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 AKAP8O43823 692 aaKnown RBP4.78□□□□□ -1.64
CCSER1-211ENST00000513522 ICMTO60725 284 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 ABL1P00519 1130 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 ESRRAP11474 423 aaPredicted RBP4.78□□□□□ -1.64
CCSER1-211ENST00000513522 IFNAR1P17181 557 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 ERCC3P19447 782 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 KIF5BP33176 963 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 STAT3P40763 770 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 GCLCP48506 637 aaPredicted RBP4.78□□□□□ -1.64
CCSER1-211ENST00000513522 MAP2K1Q02750 393 aaPredicted RBP4.78□□□□□ -1.64
CCSER1-211ENST00000513522 IKQ13123 557 aaPredicted RBP4.78□□□□□ -1.64
CCSER1-211ENST00000513522 PABPC4Q13310 644 aaKnown RBP eCLIP4.78□□□□□ -1.64
CCSER1-211ENST00000513522 ANKRD1Q15327 319 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 FAM110CQ1W6H9 321 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 QRICH1Q2TAL8 776 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 MUM1L1Q5H9M0 696 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 OTUD7BQ6GQQ9 843 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 SYNE3Q6ZMZ3 975 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 FAM160B2Q86V87 743 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 HOMER1Q86YM7 354 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 RIOX2Q8IUF8 465 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 CCDC83Q8IWF9 413 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 NSUN7Q8NE18 718 aaKnown RBP4.78□□□□□ -1.64
CCSER1-211ENST00000513522 CTCFLQ8NI51 663 aaPredicted RBP4.78□□□□□ -1.64
CCSER1-211ENST00000513522 ZNF296Q8WUU4 475 aaPredicted RBP4.78□□□□□ -1.64
CCSER1-211ENST00000513522 CLEC4DQ8WXI8 215 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 SNX21Q969T3 373 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 AIFM3Q96NN9 605 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 SPZ1Q9BXG8 430 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 TUT1Q9H6E5 874 aaKnown RBP4.78□□□□□ -1.64
CCSER1-211ENST00000513522 GJB4Q9NTQ9 266 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms