RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 KIAA0319Q5VV43 1072 aa12.73□□□□□ -0.37
RNF4-218ENST00000513284 ZC3H14Q6PJT7 736 aaKnown RBP12.73□□□□□ -0.37
RNF4-218ENST00000513284 PPFIBP1Q86W92 1011 aa12.73□□□□□ -0.37
RNF4-218ENST00000513284 TMEM87AQ8NBN3 555 aa12.73□□□□□ -0.37
RNF4-218ENST00000513284 CMASQ8NFW8 434 aaPredicted RBP12.73□□□□□ -0.37
RNF4-218ENST00000513284 LPPQ93052 612 aa12.73□□□□□ -0.37
RNF4-218ENST00000513284 RPP25Q9BUL9 199 aaKnown RBP12.73□□□□□ -0.37
RNF4-218ENST00000513284 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
RNF4-218ENST00000513284 ZNF302Q9NR11 478 aa12.73□□□□□ -0.37
RNF4-218ENST00000513284 COL4A3Q01955 1670 aa12.73□□□□□ -0.37
RNF4-218ENST00000513284 DOCK8Q8NF50 2099 aa12.73□□□□□ -0.37
RNF4-218ENST00000513284 CCDC195A0A1B0GUA6 201 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 E7EWF7 191 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 ANHXE9PGG2 379 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 BACH1O14867 736 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 KINO60870 393 aaKnown RBP12.72□□□□□ -0.37
RNF4-218ENST00000513284 ZC3H11AO75152 810 aaKnown RBP eCLIP12.72□□□□□ -0.37
RNF4-218ENST00000513284 PAPLNO95428 1278 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 ADRB1P08588 477 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 MYBP10242 640 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 DARSP14868 501 aaKnown RBP12.72□□□□□ -0.37
RNF4-218ENST00000513284 KLRC2P26717 231 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 GBP2P32456 591 aaPredicted RBP12.72□□□□□ -0.37
RNF4-218ENST00000513284 SLC11A1P49279 550 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 STARD6P59095 220 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 PTH1RQ03431 593 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 LONRF3Q496Y0 759 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 TYW1BQ6NUM6 668 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 EFCAB12Q6NXP0 572 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 DCLRE1AQ6PJP8 1040 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 TAS1R1Q7RTX1 841 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 TRMT1LQ7Z2T5 733 aaKnown RBP12.72□□□□□ -0.37
RNF4-218ENST00000513284 ZNF280BQ86YH2 543 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 ZNF654Q8IZM8 581 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 LRRC71Q8N4P6 559 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 PJA1Q8NG27 643 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 LY9Q9HBG7 655 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 PARD6AQ9NPB6 346 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 ARHGEF3Q9NR81 526 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 TBC1D13Q9NVG8 400 aa12.72□□□□□ -0.37
RNF4-218ENST00000513284 MTF2Q9Y483 593 aaPredicted RBP12.72□□□□□ -0.37
RNF4-218ENST00000513284 ERICH2A1L162 156 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 HIP1O00291 1037 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 OFD1O75665 1012 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 RFPL2O75678 378 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 DDHD2O94830 711 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 LAMP2P13473 410 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 PHKA2P46019 1235 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 AFF1P51825 1210 aaKnown RBP12.71□□□□□ -0.37
RNF4-218ENST00000513284 TRDNQ13061 729 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 ZNF528Q3MIS6 628 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 FAM160B1Q5W0V3 765 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 BBXQ8WY36 941 aaPredicted RBP12.71□□□□□ -0.37
RNF4-218ENST00000513284 NELL1Q92832 810 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 NXPE3Q969Y0 559 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 ZNF707Q96C28 371 aaPredicted RBP12.71□□□□□ -0.37
RNF4-218ENST00000513284 MRPL9Q9BYD2 267 aaKnown RBP12.71□□□□□ -0.37
RNF4-218ENST00000513284 RHOBTB2Q9BYZ6 727 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 RWDD1Q9H446 243 aaPredicted RBP12.71□□□□□ -0.37
RNF4-218ENST00000513284 SLC2A4RGQ9NR83 387 aa12.71□□□□□ -0.37
RNF4-218ENST00000513284 SEC63Q9UGP8 760 aaKnown RBP12.71□□□□□ -0.37
RNF4-218ENST00000513284 FAM86B1E9PN63 330 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 SSBP05455 408 aaKnown RBP eCLIP12.7□□□□□ -0.38
RNF4-218ENST00000513284 FAM86B2P0C5J1 330 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 RXRAP19793 462 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 SDHBP21912 280 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 GPC3P51654 580 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 GPC5P78333 572 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 HTR4Q13639 388 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 MB21D2Q8IYB1 491 aaPredicted RBP12.7□□□□□ -0.38
RNF4-218ENST00000513284 CCDC82Q8N4S0 544 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 ZBTB44Q8NCP5 570 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 LZTS2Q9BRK4 669 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 DDX23Q9BUQ8 820 aaKnown RBP12.7□□□□□ -0.38
RNF4-218ENST00000513284 TRAIPQ9BWF2 469 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 MAN1C1Q9NR34 630 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 NCDNQ9UBB6 729 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 AKT3Q9Y243 479 aa12.7□□□□□ -0.38
RNF4-218ENST00000513284 CLUHO75153 1309 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 IGLV3-22A0A075B6J6 115 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 PRR5-ARHGAP8B1AHC4 643 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 ADAMTS3O15072 1205 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 MAGEB2O15479 319 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 ZNF862O60290 1169 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 LILRB5O75023 590 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 EFEMP2O95967 443 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 RFX1P22670 979 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 KIF5BP33176 963 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 ARHGAP8P85298 464 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 DRP2Q13474 957 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 NONOQ15233 471 aaKnown RBP eCLIP12.69□□□□□ -0.386e-7■■■□□ 19.2
RNF4-218ENST00000513284 NOMO2Q5JPE7 1267 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 MIS18BP1Q6P0N0 1132 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 GPR161Q8N6U8 529 aaKnown RBP12.69□□□□□ -0.38
RNF4-218ENST00000513284 NCOA7Q8NI08 942 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 CTCFLQ8NI51 663 aaPredicted RBP12.69□□□□□ -0.38
RNF4-218ENST00000513284 RTKNQ9BST9 563 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 EMILIN2Q9BXX0 1053 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 FBXO4Q9UKT5 387 aa12.69□□□□□ -0.38
RNF4-218ENST00000513284 FRYQ5TBA9 3013 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms