RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 ZNF274Q96GC6 653 aaPredicted RBP12.34□□□□□ -0.43
SKP2-207ENST00000513263 CASD1Q96PB1 797 aa12.34□□□□□ -0.43
SKP2-207ENST00000513263 PPP1R16BQ96T49 567 aa12.34□□□□□ -0.43
SKP2-207ENST00000513263 NIFKQ9BYG3 293 aaKnown RBP12.34□□□□□ -0.43
SKP2-207ENST00000513263 ADAMTS10Q9H324 1103 aa12.34□□□□□ -0.43
SKP2-207ENST00000513263 DZANK1Q9NVP4 752 aa12.34□□□□□ -0.43
SKP2-207ENST00000513263 MYO15AQ9UKN7 3530 aa12.33□□□□□ -0.44
SKP2-207ENST00000513263 PSMD10O75832 226 aa12.33□□□□□ -0.44
SKP2-207ENST00000513263 PDIA3P30101 505 aaKnown RBP12.33□□□□□ -0.44
SKP2-207ENST00000513263 NUBP1P53384 320 aa12.33□□□□□ -0.44
SKP2-207ENST00000513263 POLGP54098 1239 aaPredicted RBP12.33□□□□□ -0.44
SKP2-207ENST00000513263 PTPN5P54829 565 aa12.33□□□□□ -0.44
SKP2-207ENST00000513263 SIGLEC14Q08ET2 396 aa12.33□□□□□ -0.44
SKP2-207ENST00000513263 NONOQ15233 471 aaKnown RBP eCLIP12.33□□□□□ -0.44
SKP2-207ENST00000513263 ANKRD54Q6NXT1 300 aa12.33□□□□□ -0.44
SKP2-207ENST00000513263 GLB1LQ6UWU2 654 aa12.33□□□□□ -0.44
SKP2-207ENST00000513263 TRIM67Q6ZTA4 783 aa12.33□□□□□ -0.44
SKP2-207ENST00000513263 TRMT1LQ7Z2T5 733 aaKnown RBP12.33□□□□□ -0.44
SKP2-207ENST00000513263 TMC7Q7Z402 723 aa12.33□□□□□ -0.44
SKP2-207ENST00000513263 BLIDQ8IZY5 108 aa12.33□□□□□ -0.44
SKP2-207ENST00000513263 SLC7A3Q8WY07 619 aa12.33□□□□□ -0.44
SKP2-207ENST00000513263 TM6SF1Q9BZW5 370 aa12.33□□□□□ -0.44
SKP2-207ENST00000513263 CDHR5Q9HBB8 845 aa12.33□□□□□ -0.44
SKP2-207ENST00000513263 MTCL1Q9Y4B5 1905 aaKnown RBP12.33□□□□□ -0.44
SKP2-207ENST00000513263 TMEM221A6NGB7 291 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 M0R296 226 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 ZNF862O60290 1169 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 EIF5BO60841 1220 aaKnown RBP12.32□□□□□ -0.44
SKP2-207ENST00000513263 TECP42680 631 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 MTHFRP42898 656 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 ERVFC1P60507 584 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 PSMC5P62195 406 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 ZXDAP98168 799 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 NHLH1Q02575 133 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 KCNC3Q14003 757 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 TARBP2Q15633 366 aaKnown RBP12.32□□□□□ -0.44
SKP2-207ENST00000513263 TWF2Q6IBS0 349 aaKnown RBP12.32□□□□□ -0.44
SKP2-207ENST00000513263 ELMSAN1Q6PJG2 1045 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 ZBTB33Q86T24 672 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 PPFIBP1Q86W92 1011 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 RNF169Q8NCN4 708 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 URGCPQ8TCY9 931 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 PGBD4Q96DM1 585 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 RIPOR3Q96MK2 946 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 FAM20AQ96MK3 541 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 UNC45AQ9H3U1 944 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 STK36Q9NRP7 1315 aa12.32□□□□□ -0.44
SKP2-207ENST00000513263 C2orf16Q68DN1 1984 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 IGKV6-21A0A0C4DH24 114 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 CCDC194A0A1B0GVG4 234 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 TBX3O15119 743 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 MAFO75444 373 aaPredicted RBP12.31□□□□□ -0.44
SKP2-207ENST00000513263 CPA1P15085 419 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 RFC5P40937 340 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 PHKA2P46019 1235 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 CCT2P78371 535 aaKnown RBP12.31□□□□□ -0.44
SKP2-207ENST00000513263 PTPN21Q16825 1174 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 MTERF2Q49AM1 385 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 ZNF598Q86UK7 904 aaKnown RBP12.31□□□□□ -0.44
SKP2-207ENST00000513263 UBALD2Q8IYN6 164 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 SLC39A11Q8N1S5 342 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 FBXL6Q8N531 539 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 PBXIP1Q96AQ6 731 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 RPGRIP1Q96KN7 1286 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 FBXL18Q96ME1 805 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 MBOAT7Q96N66 472 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 ZSWIM6Q9HCJ5 1215 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 DDX25Q9UHL0 483 aaKnown RBP12.31□□□□□ -0.44
SKP2-207ENST00000513263 PIN4Q9Y237 131 aaKnown RBP12.31□□□□□ -0.44
SKP2-207ENST00000513263 IRAK3Q9Y616 596 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 CNTNAP2Q9UHC6 1331 aa12.31□□□□□ -0.44
SKP2-207ENST00000513263 PER2O15055 1255 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 QARSP47897 775 aaKnown RBP12.3□□□□□ -0.44
SKP2-207ENST00000513263 RNASELQ05823 741 aaKnown RBP12.3□□□□□ -0.44
SKP2-207ENST00000513263 PPP2R5CQ13362 524 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 MTMR3Q13615 1198 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 UGCGQ16739 394 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 CLLU1OSQ5K130 101 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 PPP4R3AQ6IN85 833 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 B3GNT9Q6UX72 402 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 CATSPER4Q7RTX7 472 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 NEK8Q86SG6 692 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 RHPN2Q8IUC4 686 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 MRPL43Q8N983 215 aaKnown RBP12.3□□□□□ -0.44
SKP2-207ENST00000513263 CNNM3Q8NE01 707 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 ETNPPLQ8TBG4 499 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 HELQQ8TDG4 1101 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 TCP11Q8WWU5 503 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 PSPC1Q8WXF1 523 aaKnown RBP12.3□□□□□ -0.44
SKP2-207ENST00000513263 WASF1Q92558 559 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 ADAM7Q9H2U9 754 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 BRMS1Q9HCU9 246 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 UBN1Q9NPG3 1134 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 FAM105AQ9NUU6 356 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 RNF19AQ9NV58 838 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 KANSL3Q9P2N6 904 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 SUCLA2Q9P2R7 463 aaPredicted RBP12.3□□□□□ -0.44
SKP2-207ENST00000513263 DAXXQ9UER7 740 aaPredicted RBP12.3□□□□□ -0.44
SKP2-207ENST00000513263 DPP7Q9UHL4 492 aa12.3□□□□□ -0.44
SKP2-207ENST00000513263 CFAP54Q96N23 3096 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms