RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 BSNDQ8WZ55 320 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 HPS3Q969F9 1004 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 IFT74Q96LB3 600 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 FUCA2Q9BTY2 467 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 KCNG1Q9UIX4 513 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 NAMPTP43490 491 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 NPTX2P47972 431 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 NCKAP1LP55160 1127 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 LAMTOR4Q0VGL1 99 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 STK4Q13043 487 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 CAPSQ13938 189 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 C1orf53Q5VUE5 145 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 SLC39A5Q6ZMH5 540 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 RPAINQ86UA6 219 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 FAM178BQ8IXR5 827 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 KIAA0895Q8NCT3 520 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 DNAJB3Q8WWF6 145 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 KCNN1Q92952 543 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 MAP7D2Q96T17 732 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 ANP32EQ9BTT0 268 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 ST6GALNAC4Q9H4F1 302 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 MRPL44Q9H9J2 332 aaKnown RBP13.84□□□□□ -0.19
PDPN-210ENST00000513143 SLC39A2Q9NP94 309 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 TRMT13Q9NUP7 481 aaKnown RBP13.84□□□□□ -0.19
PDPN-210ENST00000513143 TBC1D7Q9P0N9 293 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 AKT3Q9Y243 479 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 GDAQ9Y2T3 454 aa13.84□□□□□ -0.19
PDPN-210ENST00000513143 SIP14410 1827 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 CCDC169A6NNP5 214 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 RPLP2P05387 115 aaKnown RBP13.83□□□□□ -0.2
PDPN-210ENST00000513143 CCDC192P0DO97 292 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 SMTNP53814 917 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 ZNF445P59923 1031 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 CDC42EP1Q00587 391 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 POU5F1BQ06416 359 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 TYRO3Q06418 890 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 PTK7Q13308 1070 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 SNX17Q15036 470 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 COBLL1Q53SF7 1204 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 COL13A1Q5TAT6 717 aaPredicted RBP13.83□□□□□ -0.2
PDPN-210ENST00000513143 EPM2AIP1Q7L775 607 aaPredicted RBP13.83□□□□□ -0.2
PDPN-210ENST00000513143 ZNF720Q7Z2F6 126 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 RHPN2Q8IUC4 686 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 KSR1Q8IVT5 923 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 FAM126BQ8IXS8 530 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 ZNF710Q8N1W2 664 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 NME8Q8N427 588 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 SLC17A8Q8NDX2 589 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 PAWRQ96IZ0 340 aaKnown RBP13.83□□□□□ -0.2
PDPN-210ENST00000513143 STRA6Q9BX79 667 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 FGFBP2Q9BYJ0 223 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 C11orf49Q9H6J7 331 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 KMT5AQ9NQR1 393 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 ANO10Q9NW15 660 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 ARHGAP28Q9P2N2 729 aa13.83□□□□□ -0.2
PDPN-210ENST00000513143 MROH7Q68CQ1 1323 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 SLC16A4O15374 487 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 B4GALT4O60513 344 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 PPP1R37O75864 691 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 CD4P01730 458 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 VTNP04004 478 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 EN2P19622 333 aaPredicted RBP13.82□□□□□ -0.2
PDPN-210ENST00000513143 SCP2P22307 547 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 NMT1P30419 496 aaKnown RBP13.82□□□□□ -0.2
PDPN-210ENST00000513143 GPC3P51654 580 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 CASP5P51878 434 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 ALCAMQ13740 583 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 TFDP1Q14186 410 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 STX1AQ16623 288 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 DPCR1Q3MIW9 517 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 ANKRD33Q7Z3H0 272 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 NECAB2Q7Z6G3 386 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 UBE2Q1Q7Z7E8 422 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 RSPH3Q86UC2 560 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 ZNF410Q86VK4 478 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 SMYD4Q8IYR2 804 aaPredicted RBP13.82□□□□□ -0.2
PDPN-210ENST00000513143 MLKLQ8NB16 471 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 RNF149Q8NC42 400 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 TMEM161BQ8NDZ6 487 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 GLIS3Q8NEA6 775 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 WNT8BQ93098 351 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 NFKBIZQ9BYH8 718 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 FAM49AQ9H0Q0 323 aaPredicted RBP13.82□□□□□ -0.2
PDPN-210ENST00000513143 TRPV6Q9H1D0 765 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 ADAMTS10Q9H324 1103 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 NOD1Q9Y239 953 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 ADGRA3Q8IWK6 1321 aa13.82□□□□□ -0.2
PDPN-210ENST00000513143 LRRIQ4A6NIV6 560 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 PPP1R3GB7ZBB8 358 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 H0YCG3 227 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 K7ENM7 598 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 EIF3DO15371 548 aaKnown RBP eCLIP13.81□□□□□ -0.2
PDPN-210ENST00000513143 GPR32O75388 356 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 GCNT3O95395 438 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 SRGAP2CP0DJJ0 459 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 MYBP10242 640 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 ABCD1P33897 745 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 PRCPP42785 496 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 ATN1P54259 1190 aaPredicted RBP13.81□□□□□ -0.2
PDPN-210ENST00000513143 NLRP11P59045 1033 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms