RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 ITGB8P26012 769 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 SHMT1P34896 483 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 EPHB4P54760 987 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 CLCQ05315 142 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 GABPAQ06546 454 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 OS9Q13438 667 aaPredicted RBP8.06□□□□□ -1.12
NR1I3-229ENST00000511748 TMEM240Q5SV17 173 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 PRAMEF13Q5VWM6 474 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 ANO1Q5XXA6 986 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 MAMDC4Q6UXC1 1216 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 ADGRA1Q86SQ6 560 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 AMOTL1Q8IY63 956 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 FAM9BQ8IZU0 186 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 MAGEB6Q8N7X4 407 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 KLHDC9Q8NEP7 349 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.06□□□□□ -1.12
NR1I3-229ENST00000511748 CRNKL1Q9BZJ0 848 aaKnown RBP8.06□□□□□ -1.12
NR1I3-229ENST00000511748 PRDM12Q9H4Q4 367 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 VCPKMTQ9H867 229 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 REV1Q9UBZ9 1251 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 RNF112Q9ULX5 631 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 ADAMTS5Q9UNA0 930 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 TMX2Q9Y320 296 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 CHD9Q3L8U1 2897 aa8.06□□□□□ -1.12
NR1I3-229ENST00000511748 SYNRGQ9UMZ2 1314 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 ZNFX1Q9P2E3 1918 aaKnown RBP8.05□□□□□ -1.12
NR1I3-229ENST00000511748 ARVCFO00192 962 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 MPHOSPH10O00566 681 aaKnown RBP8.05□□□□□ -1.12
NR1I3-229ENST00000511748 ERC2O15083 957 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 IDH1O75874 414 aaKnown RBP8.05□□□□□ -1.12
NR1I3-229ENST00000511748 LRIG2O94898 1065 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 HTR3BO95264 441 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 CST3P01034 146 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-229ENST00000511748 ZNF865P0CJ78 1059 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-229ENST00000511748 POU3F3P20264 500 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-229ENST00000511748 STAT3P40763 770 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 CDK7P50613 346 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 APOBRQ0VD83 1088 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 PAK2Q13177 524 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 SEPT2Q15019 361 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 SHROOM1Q2M3G4 852 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-229ENST00000511748 ZNF792Q3KQV3 632 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 SLITRK4Q8IW52 837 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 MRPL41Q8IXM3 137 aaKnown RBP8.05□□□□□ -1.12
NR1I3-229ENST00000511748 RPUSD2Q8IZ73 545 aaKnown RBP8.05□□□□□ -1.12
NR1I3-229ENST00000511748 ZNF654Q8IZM8 581 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 KCT2Q8NC54 265 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 TMEM87BQ96K49 555 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 HEXIM2Q96MH2 286 aaKnown RBP8.05□□□□□ -1.12
NR1I3-229ENST00000511748 OSBPL1AQ9BXW6 950 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 FOXQ1Q9C009 403 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 ACBD3Q9H3P7 528 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 IL23AQ9NPF7 189 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 PCDHB14Q9Y5E9 798 aa8.05□□□□□ -1.12
NR1I3-229ENST00000511748 PLXNA1Q9UIW2 1896 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 CHURC1-FNTBB4DL54 471 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 EOMESO95936 686 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 FGBP02675 491 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 GUCY1A2P33402 732 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 NKX3-2P78367 333 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 ICA1Q05084 483 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 TMEM132BQ14DG7 1078 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 KCNA10Q16322 511 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 TMEM31Q5JXX7 168 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 TMEM201Q5SNT2 666 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 ZMYM1Q5SVZ6 1142 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 PRAMEF19Q5SWL8 479 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 CCSAPQ6IQ19 270 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-229ENST00000511748 MCATQ8IVS2 390 aaKnown RBP8.04□□□□□ -1.12
NR1I3-229ENST00000511748 MIGA1Q8NAN2 632 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 PPM1EQ8WY54 764 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 NKD1Q969G9 470 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 TEX13BQ9BXU2 312 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 UPF3AQ9H1J1 476 aaKnown RBP8.04□□□□□ -1.12
NR1I3-229ENST00000511748 ABHD16BQ9H3Z7 469 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 KANSL2Q9H9L4 492 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 FBXO40Q9UH90 709 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 ADAM30Q9UKF2 790 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 PCDHA11Q9Y5I1 949 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 TRANK1O15050 2925 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 CHD7Q9P2D1 2997 aa8.04□□□□□ -1.12
NR1I3-229ENST00000511748 MUC6Q6W4X9 2439 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 NAV1Q8NEY1 1877 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 A0A1W2PRG0 241 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 VWA5AO00534 786 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 ATP2A1O14983 1001 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 ZEB2O60315 1214 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 ASGR1P07306 291 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 C6orf222P0C671 652 aaPredicted RBP8.03□□□□□ -1.12
NR1I3-229ENST00000511748 CSF2RAP15509 400 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 PLCD1P51178 756 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 GJA9P57773 515 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 DYNLL1P63167 89 aaKnown RBP8.03□□□□□ -1.12
NR1I3-229ENST00000511748 PDE4BQ07343 736 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 ZNF365Q70YC5 407 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 ERC1Q8IUD2 1116 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 FAM126BQ8IXS8 530 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 TRMT2AQ8IZ69 625 aaKnown RBP8.03□□□□□ -1.12
NR1I3-229ENST00000511748 SSH3Q8TE77 659 aa8.03□□□□□ -1.12
NR1I3-229ENST00000511748 ATG4CQ96DT6 458 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms