RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 SMC1AQ14683 1233 aaKnown RBP9.38□□□□□ -0.91
TRIO-217ENST00000511019 UGCGQ16739 394 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 MTERF2Q49AM1 385 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 Q4G0T1 1027 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 TPRNQ4KMQ1 711 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 CLLU1OSQ5K130 101 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 IER5LQ5T953 404 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 SYCE2Q6PIF2 218 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 RUFY3Q7L099 469 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 ZBTB33Q86T24 672 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 SLC39A11Q8N1S5 342 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 HELQQ8TDG4 1101 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 GJA10Q969M2 543 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 MRPL9Q9BYD2 267 aaKnown RBP9.38□□□□□ -0.91
TRIO-217ENST00000511019 NCOA5Q9HCD5 579 aaKnown RBP9.38□□□□□ -0.91
TRIO-217ENST00000511019 SUCLA2Q9P2R7 463 aaPredicted RBP9.38□□□□□ -0.91
TRIO-217ENST00000511019 SEPT9Q9UHD8 586 aaPredicted RBP9.38□□□□□ -0.91
TRIO-217ENST00000511019 SSUH2Q9Y2M2 353 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 REV3LO60673 3130 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 NCOR1O75376 2440 aa9.38□□□□□ -0.91
TRIO-217ENST00000511019 NID2Q14112 1375 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 BDP1A6H8Y1 2624 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 A0A087WZ62 844 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 CARNS1A5YM72 827 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 C2orf71A6NGG8 1288 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 NT5C1B-RDH14C9J2C7 533 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 CPLX1O14810 134 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 STBD1O95210 358 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 PTPN5P54829 565 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 ITIH3Q06033 890 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 DRP2Q13474 957 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 GIT2Q14161 759 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 PTPN21Q16825 1174 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 GALNT17Q6IS24 598 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 CPLX2Q6PUV4 134 aaKnown RBP9.37□□□□□ -0.91
TRIO-217ENST00000511019 ZNF598Q86UK7 904 aaKnown RBP9.37□□□□□ -0.91
TRIO-217ENST00000511019 RHPN2Q8IUC4 686 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 BLIDQ8IZY5 108 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 RSPH1Q8WYR4 309 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 ZNF274Q96GC6 653 aaPredicted RBP9.37□□□□□ -0.91
TRIO-217ENST00000511019 TMEM169Q96HH4 297 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 NECTIN4Q96NY8 510 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 JPH2Q9BR39 696 aaPredicted RBP9.37□□□□□ -0.91
TRIO-217ENST00000511019 SH2D3AQ9BRG2 576 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 FDXACB1Q9BRP7 624 aaPredicted RBP9.37□□□□□ -0.91
TRIO-217ENST00000511019 TRAIPQ9BWF2 469 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 SLKQ9H2G2 1235 aaPredicted RBP9.37□□□□□ -0.91
TRIO-217ENST00000511019 ADAM7Q9H2U9 754 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 TSHZ2Q9NRE2 1034 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 NR2E1Q9Y466 385 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 HCFC2Q9Y5Z7 792 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 CYP46A1Q9Y6A2 500 aa9.37□□□□□ -0.91
TRIO-217ENST00000511019 IGKV6-21A0A0C4DH24 114 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 DKC1O60832 514 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRIO-217ENST00000511019 CLASP2O75122 1294 aaKnown RBP9.36□□□□□ -0.91
TRIO-217ENST00000511019 MAFO75444 373 aaPredicted RBP9.36□□□□□ -0.91
TRIO-217ENST00000511019 DEXIO95424 95 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 TDP2O95551 362 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 SFPQP23246 707 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRIO-217ENST00000511019 AVPR2P30518 371 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 MTHFRP42898 656 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 PHKA2P46019 1235 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 PSMC5P62195 406 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 RNASELQ05823 741 aaKnown RBP9.36□□□□□ -0.91
TRIO-217ENST00000511019 NONOQ15233 471 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRIO-217ENST00000511019 LONRF3Q496Y0 759 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 ATAT1Q5SQI0 421 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 TWF2Q6IBS0 349 aaKnown RBP9.36□□□□□ -0.91
TRIO-217ENST00000511019 MOXD1Q6UVY6 613 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 GLB1LQ6UWU2 654 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 B3GNT9Q6UX72 402 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 ZNF410Q86VK4 478 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 VPS52Q8N1B4 723 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 PRSS33Q8NF86 280 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 PGBD4Q96DM1 585 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 RIPOR3Q96MK2 946 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 CEP89Q96ST8 783 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 IRF2BPLQ9H1B7 796 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 ZSWIM6Q9HCJ5 1215 aa9.36□□□□□ -0.91
TRIO-217ENST00000511019 DDX25Q9UHL0 483 aaKnown RBP9.36□□□□□ -0.91
TRIO-217ENST00000511019 TMEM150BA6NC51 233 aa9.35□□□□□ -0.91
TRIO-217ENST00000511019 MARCH6O60337 910 aa9.35□□□□□ -0.91
TRIO-217ENST00000511019 ZNF623O75123 536 aa9.35□□□□□ -0.91
TRIO-217ENST00000511019 ZC3H11AO75152 810 aaKnown RBP eCLIP9.35□□□□□ -0.91
TRIO-217ENST00000511019 OFD1O75665 1012 aa9.35□□□□□ -0.91
TRIO-217ENST00000511019 ALDH2P05091 517 aa9.35□□□□□ -0.91
TRIO-217ENST00000511019 GALTP07902 379 aa9.35□□□□□ -0.91
TRIO-217ENST00000511019 SP100P23497 879 aaPredicted RBP9.35□□□□□ -0.91
TRIO-217ENST00000511019 QARSP47897 775 aaKnown RBP9.35□□□□□ -0.91
TRIO-217ENST00000511019 POLGP54098 1239 aaPredicted RBP9.35□□□□□ -0.91
TRIO-217ENST00000511019 TOB2Q14106 344 aaPredicted RBP9.35□□□□□ -0.91
TRIO-217ENST00000511019 NOMO2Q5JPE7 1267 aa9.35□□□□□ -0.91
TRIO-217ENST00000511019 ANO5Q75V66 913 aa9.35□□□□□ -0.91
TRIO-217ENST00000511019 CATSPER4Q7RTX7 472 aa9.35□□□□□ -0.91
TRIO-217ENST00000511019 DDX53Q86TM3 631 aaKnown RBP9.35□□□□□ -0.91
TRIO-217ENST00000511019 KSR1Q8IVT5 923 aa9.35□□□□□ -0.91
TRIO-217ENST00000511019 EXOC8Q8IYI6 725 aa9.35□□□□□ -0.91
TRIO-217ENST00000511019 FAM177A1Q8N128 213 aaPredicted RBP9.35□□□□□ -0.91
TRIO-217ENST00000511019 KREMEN2Q8NCW0 462 aa9.35□□□□□ -0.91
TRIO-217ENST00000511019 LPPQ93052 612 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms