RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 SH2B1Q9NRF2 756 aaPredicted RBP13.48□□□□□ -0.25
CHFR-208ENST00000511001 TYW1Q9NV66 732 aaKnown RBP13.48□□□□□ -0.25
CHFR-208ENST00000511001 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
CHFR-208ENST00000511001 PCDHA12Q9UN75 941 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 PPME1Q9Y570 386 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 A0A0U1RQF3 1178 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 NEMFO60524 1076 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 CSPG5O95196 566 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 LYPLA2O95372 231 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
CHFR-208ENST00000511001 GTF2F1P35269 517 aaKnown RBP eCLIP13.47□□□□□ -0.25
CHFR-208ENST00000511001 IRS1P35568 1242 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 LTBRP36941 435 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 DNM2P50570 870 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 HMGN5P82970 282 aaKnown RBP13.47□□□□□ -0.25
CHFR-208ENST00000511001 CTC1Q2NKJ3 1217 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 CLLU1OSQ5K130 101 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 FBXO18Q8NFZ0 1043 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 POF1BQ8WVV4 589 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 TMEM143Q96AN5 459 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 IFT122Q9HBG6 1241 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 XPNPEP1Q9NQW7 623 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 BMP2KQ9NSY1 1161 aaPredicted RBP13.47□□□□□ -0.25
CHFR-208ENST00000511001 COL4A3BPQ9Y5P4 624 aa13.47□□□□□ -0.25
CHFR-208ENST00000511001 POTEMA6NI47 508 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 ATP2B1P20020 1258 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 RFC5P40937 340 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 TXKP42681 527 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 POLGP54098 1239 aaPredicted RBP13.46□□□□□ -0.25
CHFR-208ENST00000511001 SAFBQ15424 915 aaKnown RBP eCLIP13.46□□□□□ -0.25
CHFR-208ENST00000511001 XKR9Q5GH70 373 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 ADGRD2Q7Z7M1 963 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 TPH2Q8IWU9 490 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 COLGALT1Q8NBJ5 622 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 SLC7A3Q8WY07 619 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 NLRP4Q96MN2 994 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 TRAIPQ9BWF2 469 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 FOXP1Q9H334 677 aaPredicted RBP13.46□□□□□ -0.25
CHFR-208ENST00000511001 MINDY3Q9H8M7 445 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 CHST12Q9NRB3 414 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 PCDHGC5Q9Y5F6 944 aa13.46□□□□□ -0.25
CHFR-208ENST00000511001 H3BQ06 376 aaPredicted RBP13.45□□□□□ -0.26
CHFR-208ENST00000511001 HOXA2O43364 376 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 GAS2O43903 313 aaKnown RBP13.45□□□□□ -0.26
CHFR-208ENST00000511001 EOMESO95936 686 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 IL9P15248 144 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 SFPQP23246 707 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHFR-208ENST00000511001 MCM7P33993 719 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 PHKA2P46019 1235 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 DLX2Q07687 328 aaPredicted RBP13.45□□□□□ -0.26
CHFR-208ENST00000511001 LAMTOR4Q0VGL1 99 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 EMC2Q15006 297 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 RABEP1Q15276 862 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 SPOUT1Q5T280 376 aaKnown RBP13.45□□□□□ -0.26
CHFR-208ENST00000511001 OTUD6AQ7L8S5 288 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 FERMT3Q86UX7 667 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 EXOC8Q8IYI6 725 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 PRPF31Q8WWY3 499 aaKnown RBP13.45□□□□□ -0.26
CHFR-208ENST00000511001 PSPC1Q8WXF1 523 aaKnown RBP13.45□□□□□ -0.26
CHFR-208ENST00000511001 INO80BQ9C086 356 aaPredicted RBP13.45□□□□□ -0.26
CHFR-208ENST00000511001 ANKEF1Q9NU02 776 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 CLDND1Q9NY35 253 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 DACT1Q9NYF0 836 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 PCDHB12Q9Y5F1 795 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 MUC6Q6W4X9 2439 aa13.45□□□□□ -0.26
CHFR-208ENST00000511001 A0A087WWV3 80 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 GRXCR2A6NFK2 248 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 MEIS3P2A8K0S8 358 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 LINC01565O15544 149 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 FGF18O76093 207 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 CD2BP2O95400 341 aaKnown RBP13.44□□□□□ -0.26
CHFR-208ENST00000511001 SPATA31C1P0DKV0 1188 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 LAG3P18627 525 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 UBE3AQ05086 875 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 ZNF174Q15697 407 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 PTCRAQ6ISU1 281 aaPredicted RBP13.44□□□□□ -0.26
CHFR-208ENST00000511001 CATSPER4Q7RTX7 472 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 SRGAP1Q7Z6B7 1085 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 RNF169Q8NCN4 708 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 HELQQ8TDG4 1101 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 TCP11Q8WWU5 503 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 MTRQ99707 1265 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 EPHX3Q9H6B9 360 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 CD320Q9NPF0 282 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 AAASQ9NRG9 546 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 AGPAT5Q9NUQ2 364 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 PIN4Q9Y237 131 aaKnown RBP13.44□□□□□ -0.26
CHFR-208ENST00000511001 HCN4Q9Y3Q4 1203 aa13.44□□□□□ -0.26
CHFR-208ENST00000511001 TDRD15B5MCY1 1934 aaKnown RBP13.44□□□□□ -0.26
CHFR-208ENST00000511001 FSCN2O14926 492 aa13.43□□□□□ -0.26
CHFR-208ENST00000511001 ASAP2O43150 1006 aa13.43□□□□□ -0.26
CHFR-208ENST00000511001 NCK2O43639 380 aa13.43□□□□□ -0.26
CHFR-208ENST00000511001 ZNF623O75123 536 aa13.43□□□□□ -0.26
CHFR-208ENST00000511001 TBX10O75333 385 aa13.43□□□□□ -0.26
CHFR-208ENST00000511001 MED24O75448 989 aa13.43□□□□□ -0.26
CHFR-208ENST00000511001 SRGAP2CP0DJJ0 459 aa13.43□□□□□ -0.26
CHFR-208ENST00000511001 RARRES1P49788 294 aa13.43□□□□□ -0.26
CHFR-208ENST00000511001 ERVFC1P60507 584 aa13.43□□□□□ -0.26
CHFR-208ENST00000511001 PLCB3Q01970 1234 aa13.43□□□□□ -0.26
CHFR-208ENST00000511001 ADAM15Q13444 863 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms