RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 PLCB4Q15147 1175 aa13.61□□□□□ -0.23
LIN54-210ENST00000510877 ANKS1AQ92625 1134 aa13.61□□□□□ -0.23
LIN54-210ENST00000510877 A0A087WZ62 844 aa13.61□□□□□ -0.23
LIN54-210ENST00000510877 STX10O60499 249 aa13.61□□□□□ -0.23
LIN54-210ENST00000510877 KIF12Q96FN5 646 aa13.61□□□□□ -0.23
LIN54-210ENST00000510877 FDXACB1Q9BRP7 624 aaPredicted RBP13.61□□□□□ -0.23
LIN54-210ENST00000510877 ZMYND12Q9H0C1 365 aa13.61□□□□□ -0.23
LIN54-210ENST00000510877 LY75O60449 1722 aa13.61□□□□□ -0.23
LIN54-210ENST00000510877 BFSP1Q12934 665 aa13.61□□□□□ -0.23
LIN54-210ENST00000510877 ZRSR2Q15696 482 aaKnown RBP13.61□□□□□ -0.23
LIN54-210ENST00000510877 PLPP4Q5VZY2 271 aa13.61□□□□□ -0.23
LIN54-210ENST00000510877 APPL2Q8NEU8 664 aa13.61□□□□□ -0.23
LIN54-210ENST00000510877 RPGRIP1Q96KN7 1286 aa13.61□□□□□ -0.23
LIN54-210ENST00000510877 RAD9AQ99638 391 aa13.61□□□□□ -0.23
LIN54-210ENST00000510877 AGO4Q9HCK5 861 aaKnown RBP13.61□□□□□ -0.23
LIN54-210ENST00000510877 USP54Q70EL1 1684 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 ZSCAN22P10073 491 aaPredicted RBP13.6□□□□□ -0.23
LIN54-210ENST00000510877 KCNA5P22460 613 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 EIF4BP23588 611 aaKnown RBP13.6□□□□□ -0.23
LIN54-210ENST00000510877 LONP1P36776 959 aaKnown RBP13.6□□□□□ -0.23
LIN54-210ENST00000510877 MYL7Q01449 175 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 KYAT1Q16773 422 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 POTEDQ86YR6 584 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 LARP4BQ92615 738 aaKnown RBP13.6□□□□□ -0.23
LIN54-210ENST00000510877 NPTXRO95502 500 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 SNAI1O95863 264 aaPredicted RBP13.6□□□□□ -0.23
LIN54-210ENST00000510877 IPO4Q8TEX9 1081 aaKnown RBP13.6□□□□□ -0.23
LIN54-210ENST00000510877 MRPS27Q92552 414 aaKnown RBP13.6□□□□□ -0.23
LIN54-210ENST00000510877 SENP2Q9HC62 589 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 SPG21Q9NZD8 308 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 TREHO43280 583 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 IVLP07476 585 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 PLA2G4BP0C869 781 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 GTF2F1P35269 517 aaKnown RBP eCLIP13.6□□□□□ -0.235e-7■■■■■ 29.3
LIN54-210ENST00000510877 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
LIN54-210ENST00000510877 SEC23AQ15436 765 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 CCDC181Q5TID7 509 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 PANK4Q9NVE7 773 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 MAGED2Q9UNF1 606 aaPredicted RBP13.6□□□□□ -0.23
LIN54-210ENST00000510877 TJP1Q07157 1748 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 CXCL14O95715 111 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 MAP3K10Q02779 954 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 GOLGA8FQ08AF8 430 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 GOLGA8DPQ0D2H9 430 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 VPS36Q86VN1 386 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 GANCQ8TET4 914 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 CYP26B1Q9NR63 512 aa13.6□□□□□ -0.23
LIN54-210ENST00000510877 SLC16A4O15374 487 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 LDHAP00338 332 aaKnown RBP13.59□□□□□ -0.23
LIN54-210ENST00000510877 TMEM206Q9H813 350 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 SERPINC1P01008 464 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 POMCP01189 267 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 AMPD2Q01433 879 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 ZNF576Q9H609 170 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 RSAD1Q9HA92 442 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 OGDHLQ9ULD0 1010 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 BIN1O00499 593 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 ANTXR2P58335 489 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 LRRC26Q2I0M4 334 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 CCDC91Q7Z6B0 441 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 KIF18AQ8NI77 898 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 PRPF31Q8WWY3 499 aaKnown RBP13.59□□□□□ -0.23
LIN54-210ENST00000510877 RIPOR3Q96MK2 946 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 SPAG5Q96R06 1193 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 KLK14Q9P0G3 267 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 GJD2Q9UKL4 321 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 PHF24Q9UPV7 400 aa13.59□□□□□ -0.23
LIN54-210ENST00000510877 COLQQ9Y215 455 aaPredicted RBP13.59□□□□□ -0.23
LIN54-210ENST00000510877 AFDNP55196 1824 aaKnown RBP13.58□□□□□ -0.23
LIN54-210ENST00000510877 SFI1A8K8P3 1242 aa13.58□□□□□ -0.23
LIN54-210ENST00000510877 H7C4K7 107 aa13.58□□□□□ -0.23
LIN54-210ENST00000510877 ADH1AP07327 375 aa13.58□□□□□ -0.23
LIN54-210ENST00000510877 SRGAP1Q7Z6B7 1085 aa13.58□□□□□ -0.23
LIN54-210ENST00000510877 NSUN7Q8NE18 718 aaKnown RBP13.58□□□□□ -0.23
LIN54-210ENST00000510877 GJA10Q969M2 543 aa13.58□□□□□ -0.23
LIN54-210ENST00000510877 TOX2Q96NM4 488 aa13.58□□□□□ -0.23
LIN54-210ENST00000510877 SAMD11Q96NU1 681 aa13.58□□□□□ -0.23
LIN54-210ENST00000510877 NXF1Q9UBU9 619 aaKnown RBP13.58□□□□□ -0.23
LIN54-210ENST00000510877 SPATA31C2B4DYI2 1134 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 KRT5P13647 590 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 LRRC43Q8N309 656 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 ANKEF1Q9NU02 776 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 ST3GAL5Q9UNP4 418 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 CNTNAP5Q8WYK1 1306 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 CSDE1O75534 798 aaKnown RBP13.58□□□□□ -0.24
LIN54-210ENST00000510877 ZNF560Q96MR9 790 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 TUFT1Q9NNX1 390 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 HCN4Q9Y3Q4 1203 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 CASP8AP2Q9UKL3 1982 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 CUTAO60888 179 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 CDC25AP30304 524 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 ORC2Q13416 577 aaPredicted RBP13.58□□□□□ -0.24
LIN54-210ENST00000510877 FAM26FQ5R3K3 315 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 POTEGQ6S5H5 508 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 POTEEQ6S8J3 1075 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 SLC24A5Q71RS6 500 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 NUP62CLQ9H1M0 184 aa13.58□□□□□ -0.24
LIN54-210ENST00000510877 STK36Q9NRP7 1315 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 CAPN9O14815 690 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 MSH4O15457 936 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms