RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 DNAJB1P25685 340 aa11.51□□□□□ -0.57
PFDN1-203ENST00000510217 YWHABP31946 246 aaKnown RBP11.51□□□□□ -0.57
PFDN1-203ENST00000510217 CTTNQ14247 550 aaKnown RBP11.51□□□□□ -0.57
PFDN1-203ENST00000510217 ECHDC2Q86YB7 292 aa11.51□□□□□ -0.57
PFDN1-203ENST00000510217 RHPN2Q8IUC4 686 aa11.51□□□□□ -0.57
PFDN1-203ENST00000510217 KSR1Q8IVT5 923 aa11.51□□□□□ -0.57
PFDN1-203ENST00000510217 HS6ST3Q8IZP7 471 aa11.51□□□□□ -0.57
PFDN1-203ENST00000510217 KLHL23Q8NBE8 558 aa11.51□□□□□ -0.57
PFDN1-203ENST00000510217 C8orf76Q96K31 380 aa11.51□□□□□ -0.57
PFDN1-203ENST00000510217 CEP170P1Q96L14 293 aa11.51□□□□□ -0.57
PFDN1-203ENST00000510217 ZSCAN31Q96LW9 406 aaPredicted RBP11.51□□□□□ -0.57
PFDN1-203ENST00000510217 NLRP4Q96MN2 994 aa11.51□□□□□ -0.57
PFDN1-203ENST00000510217 GBP4Q96PP9 640 aa11.51□□□□□ -0.57
PFDN1-203ENST00000510217 MTMR9Q96QG7 549 aa11.51□□□□□ -0.57
PFDN1-203ENST00000510217 FDXACB1Q9BRP7 624 aaPredicted RBP11.51□□□□□ -0.57
PFDN1-203ENST00000510217 GCOM2Q9BZD3 368 aaPredicted RBP11.51□□□□□ -0.57
PFDN1-203ENST00000510217 TMEM60Q9H2L4 133 aa11.51□□□□□ -0.57
PFDN1-203ENST00000510217 SH2B1Q9NRF2 756 aaPredicted RBP11.51□□□□□ -0.57
PFDN1-203ENST00000510217 BMP2KQ9NSY1 1161 aaPredicted RBP11.51□□□□□ -0.57
PFDN1-203ENST00000510217 SUCLA2Q9P2R7 463 aaPredicted RBP11.51□□□□□ -0.57
PFDN1-203ENST00000510217 PPME1Q9Y570 386 aa11.51□□□□□ -0.57
PFDN1-203ENST00000510217 POTEMA6NI47 508 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 ZBTB39O15060 712 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 KCNA5P22460 613 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 SFPQP23246 707 aaKnown RBP eCLIP11.5□□□□□ -0.57
PFDN1-203ENST00000510217 RFC5P40937 340 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 DNM2P50570 870 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 POLGP54098 1239 aaPredicted RBP11.5□□□□□ -0.57
PFDN1-203ENST00000510217 HMGN5P82970 282 aaKnown RBP11.5□□□□□ -0.57
PFDN1-203ENST00000510217 HYAL1Q12794 435 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 EMC2Q15006 297 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 LEXMQ3ZCV2 418 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 NAALADL2Q58DX5 795 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 CLLU1OSQ5K130 101 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 ZNF598Q86UK7 904 aaKnown RBP11.5□□□□□ -0.57
PFDN1-203ENST00000510217 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.5□□□□□ -0.57
PFDN1-203ENST00000510217 SPPL3Q8TCT6 385 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 NEK9Q8TD19 979 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 SLC7A3Q8WY07 619 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 PABPC5Q96DU9 382 aaKnown RBP11.5□□□□□ -0.57
PFDN1-203ENST00000510217 CASD1Q96PB1 797 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 EIF2AK1Q9BQI3 630 aaKnown RBP11.5□□□□□ -0.57
PFDN1-203ENST00000510217 JPH2Q9BR39 696 aaPredicted RBP11.5□□□□□ -0.57
PFDN1-203ENST00000510217 TMEM117Q9H0C3 514 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 CWH43Q9H720 699 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 ZSWIM4Q9H7M6 989 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 TTC12Q9H892 705 aaPredicted RBP11.5□□□□□ -0.57
PFDN1-203ENST00000510217 ATP6V0A4Q9HBG4 840 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 IFT122Q9HBG6 1241 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 PCDHA12Q9UN75 941 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 COL4A3BPQ9Y5P4 624 aa11.5□□□□□ -0.57
PFDN1-203ENST00000510217 A0A0U1RQF3 1178 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 HOXA2O43364 376 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 SLITRK3O94933 977 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 LYPLA2O95372 231 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 ZSCAN20P17040 1043 aaPredicted RBP11.49□□□□□ -0.57
PFDN1-203ENST00000510217 MCM7P33993 719 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 IRS1P35568 1242 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 TXKP42681 527 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 CDC42EP1Q00587 391 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 SAFBQ15424 915 aaKnown RBP eCLIP11.49□□□□□ -0.57
PFDN1-203ENST00000510217 LRRC55Q6ZSA7 311 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 LRRC43Q8N309 656 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 COLGALT1Q8NBJ5 622 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 FBXO18Q8NFZ0 1043 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 POF1BQ8WVV4 589 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 PSPC1Q8WXF1 523 aaKnown RBP11.49□□□□□ -0.57
PFDN1-203ENST00000510217 TMEM143Q96AN5 459 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 HSD17B14Q9BPX1 270 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 FOXP1Q9H334 677 aaPredicted RBP11.49□□□□□ -0.57
PFDN1-203ENST00000510217 XPNPEP1Q9NQW7 623 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 TYW1Q9NV66 732 aaKnown RBP11.49□□□□□ -0.57
PFDN1-203ENST00000510217 PIN4Q9Y237 131 aaKnown RBP11.49□□□□□ -0.57
PFDN1-203ENST00000510217 PCDHGC5Q9Y5F6 944 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 TTC28Q96AY4 2481 aa11.49□□□□□ -0.57
PFDN1-203ENST00000510217 H3BQ06 376 aaPredicted RBP11.48□□□□□ -0.57
PFDN1-203ENST00000510217 GAS2O43903 313 aaKnown RBP11.48□□□□□ -0.57
PFDN1-203ENST00000510217 ST18O60284 1047 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
PFDN1-203ENST00000510217 HSP90AA1P07900 732 aaKnown RBP11.48□□□□□ -0.57
PFDN1-203ENST00000510217 LAG3P18627 525 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 ATP2B1P20020 1258 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 GTF2F1P35269 517 aaKnown RBP eCLIP11.48□□□□□ -0.57
PFDN1-203ENST00000510217 LTBRP36941 435 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 LAMTOR4Q0VGL1 99 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 CTC1Q2NKJ3 1217 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 XKR9Q5GH70 373 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 SPOUT1Q5T280 376 aaKnown RBP11.48□□□□□ -0.57
PFDN1-203ENST00000510217 CLEC17AQ6ZS10 378 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 OTUD6AQ7L8S5 288 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 ADGRD2Q7Z7M1 963 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 FERMT3Q86UX7 667 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 TPH2Q8IWU9 490 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 EXOC8Q8IYI6 725 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 RNF169Q8NCN4 708 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 HELQQ8TDG4 1101 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 RNF25Q96BH1 459 aaPredicted RBP11.48□□□□□ -0.57
PFDN1-203ENST00000510217 MTRQ99707 1265 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 TRAIPQ9BWF2 469 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 MINDY3Q9H8M7 445 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms