RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 HLTFQ14527 1009 aaKnown RBP eCLIP5.18□□□□□ -1.58
NIPBL-206ENST00000509429 KRT72Q14CN4 511 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 TAF7Q15545 349 aaPredicted RBP5.18□□□□□ -1.58
NIPBL-206ENST00000509429 TTLL5Q6EMB2 1281 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 ZNF449Q6P9G9 518 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 SYNE3Q6ZMZ3 975 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 TRIM74Q86UV6 250 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 TRIM73Q86UV7 250 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 FUKQ8N0W3 1084 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 SPICE1Q8N0Z3 855 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 TEX9Q8N6V9 391 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 UROC1Q96N76 676 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 SETDB2Q96T68 719 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 NELL2Q99435 816 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 OSBPL5Q9H0X9 879 aaPredicted RBP5.18□□□□□ -1.58
NIPBL-206ENST00000509429 NGRNQ9NPE2 291 aaKnown RBP5.18□□□□□ -1.58
NIPBL-206ENST00000509429 RRAGDQ9NQL2 400 aaPredicted RBP5.18□□□□□ -1.58
NIPBL-206ENST00000509429 DIAPH3Q9NSV4 1193 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 LUZP4Q9P127 313 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 GTF2A1LQ9UNN4 478 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 REXO2Q9Y3B8 237 aaKnown RBP5.18□□□□□ -1.58
NIPBL-206ENST00000509429 RRP15Q9Y3B9 282 aaKnown RBP5.18□□□□□ -1.58
NIPBL-206ENST00000509429 RAD50Q92878 1312 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 ERICH3Q5RHP9 1530 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 CFAP65Q6ZU64 1925 aaKnown RBP5.17□□□□□ -1.58
NIPBL-206ENST00000509429 BIVM-ERCC5R4GMW8 1640 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 SMTNL1A8MU46 457 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 F8VZ95 297 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 FOXN3O00409 490 aaPredicted RBP5.17□□□□□ -1.58
NIPBL-206ENST00000509429 SGTAO43765 313 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 RLBP1P12271 317 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 GYS1P13807 737 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 POU3F3P20264 500 aaPredicted RBP5.17□□□□□ -1.58
NIPBL-206ENST00000509429 GUCY2CP25092 1073 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 CD38P28907 300 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 POLR2BP30876 1174 aaKnown RBP5.17□□□□□ -1.58
NIPBL-206ENST00000509429 COPAP53621 1224 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 BPIFB3P59826 476 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 UBXN2AP68543 259 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 RBM6P78332 1123 aaKnown RBP5.17□□□□□ -1.58
NIPBL-206ENST00000509429 FANCCQ00597 558 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 EXOSC10Q01780 885 aaKnown RBP5.17□□□□□ -1.58
NIPBL-206ENST00000509429 NUCB1Q02818 461 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 ARID5AQ03989 594 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 AUHQ13825 339 aaKnown RBP5.17□□□□□ -1.58
NIPBL-206ENST00000509429 SLMAPQ14BN4 828 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 MUM1Q2TAK8 710 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 PREPLQ4J6C6 727 aaPredicted RBP5.17□□□□□ -1.58
NIPBL-206ENST00000509429 UNC5DQ6UXZ4 953 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 MORC1Q86VD1 984 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 ERC1Q8IUD2 1116 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 FAM184AQ8NB25 1140 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 TBC1D22AQ8WUA7 517 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 GATAD2BQ8WXI9 593 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 ZCCHC14Q8WYQ9 949 aaKnown RBP5.17□□□□□ -1.58
NIPBL-206ENST00000509429 SH3KBP1Q96B97 665 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 FAM89AQ96GI7 184 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 FEZ1Q99689 392 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 NOL10Q9BSC4 688 aaKnown RBP5.17□□□□□ -1.58
NIPBL-206ENST00000509429 SELENOOQ9BVL4 669 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 RIOX1Q9H6W3 641 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 ZNF703Q9H7S9 590 aaPredicted RBP5.17□□□□□ -1.58
NIPBL-206ENST00000509429 VEZTQ9HBM0 779 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 EXOC1Q9NV70 894 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 CPSF2Q9P2I0 782 aaKnown RBP5.17□□□□□ -1.58
NIPBL-206ENST00000509429 SEL1LQ9UBV2 794 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 CLIP2Q9UDT6 1046 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 GTF3C4Q9UKN8 822 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 SUFUQ9UMX1 484 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 N6AMT1Q9Y5N5 214 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 SLC4A7Q9Y6M7 1214 aa5.17□□□□□ -1.58
NIPBL-206ENST00000509429 PIK3R4Q99570 1358 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 VPS8Q8N3P4 1428 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 hCG_1984214I3L0E3 225 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 KRT38O76015 456 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 LMNAP02545 664 aaKnown RBP5.16□□□□□ -1.58
NIPBL-206ENST00000509429 UBA7P41226 1012 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 KCNJ4P48050 445 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 UBASH3AP57075 661 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 MORC3Q14149 939 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 EIF4A2Q14240 407 aaKnown RBP5.16□□□□□ -1.58
NIPBL-206ENST00000509429 PTPN14Q15678 1187 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 BRDTQ58F21 947 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-206ENST00000509429 FAM83BQ5T0W9 1011 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 CDCA2Q69YH5 1023 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-206ENST00000509429 GAREM2Q75VX8 874 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 KIAA0825Q8IV33 1275 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 CPXCR1Q8N123 301 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 HDAC7Q8WUI4 952 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 FAM81BQ96LP2 452 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 MAK16Q9BXY0 300 aaKnown RBP5.16□□□□□ -1.58
NIPBL-206ENST00000509429 SLKQ9H2G2 1235 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-206ENST00000509429 QPCTLQ9NXS2 382 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 CFAP45Q9UL16 551 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 BLOC1S6Q9UL45 172 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 BARX2Q9UMQ3 279 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-206ENST00000509429 ATP6V0A2Q9Y487 856 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 SQORQ9Y6N5 450 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 SYNJ1O43426 1573 aa5.16□□□□□ -1.58
NIPBL-206ENST00000509429 KINO60870 393 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms