RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 MINDY3Q9H8M7 445 aa17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 BMP2KQ9NSY1 1161 aaPredicted RBP17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 TMEM161AQ9NX61 479 aa17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 PRUNE2Q8WUY3 3088 aa17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 A0A0U1RQF3 1178 aa17.97■□□□□ 0.47
PDLIM5-212ENST00000509333 GTPBP6O43824 516 aaPredicted RBP17.97■□□□□ 0.47
PDLIM5-212ENST00000509333 RB1P06400 928 aa17.97■□□□□ 0.47
PDLIM5-212ENST00000509333 POU5F1BQ06416 359 aa17.97■□□□□ 0.47
PDLIM5-212ENST00000509333 DTHD1Q6ZMT9 781 aa17.97■□□□□ 0.47
PDLIM5-212ENST00000509333 SRGAP1Q7Z6B7 1085 aa17.97■□□□□ 0.47
PDLIM5-212ENST00000509333 NLRP4Q96MN2 994 aa17.97■□□□□ 0.47
PDLIM5-212ENST00000509333 ATP6V0A4Q9HBG4 840 aa17.97■□□□□ 0.47
PDLIM5-212ENST00000509333 MYO7AQ13402 2215 aa17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 C5orf67F2Z3F1 127 aa17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 EOMESO95936 686 aa17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 SYT1P21579 422 aa17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 HOXA11P31270 313 aaPredicted RBP17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 CCT6AP40227 531 aaKnown RBP17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 PTENP60484 403 aa17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 ATP2C1P98194 919 aaPredicted RBP17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 GPM6BQ13491 265 aa17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 MXD4Q14582 209 aaPredicted RBP17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 ZNF598Q86UK7 904 aaKnown RBP17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 ECHDC2Q86YB7 292 aa17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 RNF149Q8NC42 400 aa17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 GDPD5Q8WTR4 605 aa17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 TRAIPQ9BWF2 469 aa17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 PRDM6Q9NQX0 595 aa17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 RNF19AQ9NV58 838 aa17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 STK24Q9Y6E0 443 aa17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 MRPL42Q9Y6G3 142 aaKnown RBP17.96■□□□□ 0.47
PDLIM5-212ENST00000509333 ADGRA3Q8IWK6 1321 aa17.96■□□□□ 0.46
PDLIM5-212ENST00000509333 K7ELQ4 463 aaPredicted RBP17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 ZNF623O75123 536 aa17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 CYP11B2P19099 503 aa17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 PDCP20941 246 aa17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 IBSPP21815 317 aaPredicted RBP17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 GLRA2P23416 452 aa17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 CDC25AP30304 524 aa17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 POTEGQ6S5H5 508 aa17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 CATSPER4Q7RTX7 472 aa17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 IFNLR1Q8IU57 520 aaPredicted RBP17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 ASAP3Q8TDY4 903 aa17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 MMTAG2Q9BU76 263 aaKnown RBP17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 DACT1Q9NYF0 836 aa17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 KIAA1024Q9UPX6 916 aa17.95■□□□□ 0.46
PDLIM5-212ENST00000509333 EYSQ5T1H1 3165 aa17.94■□□□□ 0.46
PDLIM5-212ENST00000509333 PP2D1A8MPX8 630 aa17.94■□□□□ 0.46
PDLIM5-212ENST00000509333 SFPQP23246 707 aaKnown RBP eCLIP17.94■□□□□ 0.46
PDLIM5-212ENST00000509333 PAN2Q504Q3 1202 aaKnown RBP17.94■□□□□ 0.46
PDLIM5-212ENST00000509333 ARL6IP4Q66PJ3 421 aaKnown RBP17.94■□□□□ 0.46
PDLIM5-212ENST00000509333 PADI6Q6TGC4 694 aa17.94■□□□□ 0.46
PDLIM5-212ENST00000509333 BRAPQ7Z569 592 aa17.94■□□□□ 0.46
PDLIM5-212ENST00000509333 CASD1Q96PB1 797 aa17.94■□□□□ 0.46
PDLIM5-212ENST00000509333 PLVAPQ9BX97 442 aa17.94■□□□□ 0.46
PDLIM5-212ENST00000509333 RAB34Q9BZG1 259 aa17.94■□□□□ 0.46
PDLIM5-212ENST00000509333 TYW1Q9NV66 732 aaKnown RBP17.94■□□□□ 0.46
PDLIM5-212ENST00000509333 RWDD3Q9Y3V2 267 aa17.94■□□□□ 0.46
PDLIM5-212ENST00000509333 TBKBP1A7MCY6 615 aa17.93■□□□□ 0.46
PDLIM5-212ENST00000509333 FGFR1P11362 822 aa17.93■□□□□ 0.46
PDLIM5-212ENST00000509333 ATF7P17544 494 aaPredicted RBP17.93■□□□□ 0.46
PDLIM5-212ENST00000509333 PHKA2P46019 1235 aa17.93■□□□□ 0.46
PDLIM5-212ENST00000509333 KRT79Q5XKE5 535 aa17.93■□□□□ 0.46
PDLIM5-212ENST00000509333 HAUS3Q68CZ6 603 aa17.93■□□□□ 0.46
PDLIM5-212ENST00000509333 LRRC55Q6ZSA7 311 aa17.93■□□□□ 0.46
PDLIM5-212ENST00000509333 MAEAQ7L5Y9 396 aa17.93■□□□□ 0.46
PDLIM5-212ENST00000509333 MICALL1Q8N3F8 863 aa17.93■□□□□ 0.46
PDLIM5-212ENST00000509333 TMEM117Q9H0C3 514 aa17.93■□□□□ 0.46
PDLIM5-212ENST00000509333 GPRC5CQ9NQ84 441 aa17.93■□□□□ 0.46
PDLIM5-212ENST00000509333 PLAGL2Q9UPG8 496 aa17.93■□□□□ 0.46
PDLIM5-212ENST00000509333 GRM6O15303 877 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 USO1O60763 962 aaKnown RBP17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 CTNNB1P35222 781 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 CAPSQ13938 189 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 TFDP1Q14186 410 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 NAALADL2Q58DX5 795 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 MRPL10Q7Z7H8 261 aaKnown RBP17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 MCPH1Q8NEM0 835 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 SPPL3Q8TCT6 385 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 SNX29Q8TEQ0 813 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 P2RX5Q93086 422 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 MRPL38Q96DV4 380 aaKnown RBP17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 CCDC43Q96MW1 224 aaKnown RBP17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 NFKBIZQ9BYH8 718 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 POLR3FQ9H1D9 316 aaPredicted RBP17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 BHMT2Q9H2M3 363 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 CWH43Q9H720 699 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 POLD4Q9HCU8 107 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 FOXD4L1Q9NU39 408 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 AGPAT5Q9NUQ2 364 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 DDX19AQ9NUU7 478 aaKnown RBP17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 DNM3Q9UQ16 869 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 COL4A6Q14031 1691 aa17.92■□□□□ 0.46
PDLIM5-212ENST00000509333 VPS37CA5D8V6 355 aaPredicted RBP17.91■□□□□ 0.46
PDLIM5-212ENST00000509333 ARHGEF35A5YM69 484 aa17.91■□□□□ 0.46
PDLIM5-212ENST00000509333 E9PMD0 336 aa17.91■□□□□ 0.46
PDLIM5-212ENST00000509333 HOXA2O43364 376 aa17.91■□□□□ 0.46
PDLIM5-212ENST00000509333 CAMK1Q14012 370 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms