RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 C9IYK1 514 aa18.84■□□□□ 0.61
CLDND1-219ENST00000508659 STX6O43752 255 aa18.84■□□□□ 0.61
CLDND1-219ENST00000508659 GTPBP6O43824 516 aaPredicted RBP18.84■□□□□ 0.61
CLDND1-219ENST00000508659 ADGRE1Q14246 886 aa18.84■□□□□ 0.61
CLDND1-219ENST00000508659 DSC3Q14574 896 aa18.84■□□□□ 0.61
CLDND1-219ENST00000508659 IL17AQ16552 155 aa18.84■□□□□ 0.61
CLDND1-219ENST00000508659 FBXO22Q8NEZ5 403 aa18.84■□□□□ 0.61
CLDND1-219ENST00000508659 C17orf80Q9BSJ5 609 aa18.84■□□□□ 0.61
CLDND1-219ENST00000508659 IFT122Q9HBG6 1241 aa18.84■□□□□ 0.61
CLDND1-219ENST00000508659 DDX19AQ9NUU7 478 aaKnown RBP18.84■□□□□ 0.61
CLDND1-219ENST00000508659 KIAA1024Q9UPX6 916 aa18.84■□□□□ 0.61
CLDND1-219ENST00000508659 RWDD3Q9Y3V2 267 aa18.84■□□□□ 0.61
CLDND1-219ENST00000508659 COL4A4P53420 1690 aaPredicted RBP18.84■□□□□ 0.61
CLDND1-219ENST00000508659 RESTQ13127 1097 aa18.83■□□□□ 0.6
CLDND1-219ENST00000508659 PAN2Q504Q3 1202 aaKnown RBP18.83■□□□□ 0.6
CLDND1-219ENST00000508659 SRGAP1Q7Z6B7 1085 aa18.83■□□□□ 0.6
CLDND1-219ENST00000508659 CMTR2Q8IYT2 770 aaKnown RBP18.83■□□□□ 0.6
CLDND1-219ENST00000508659 CRIPAKQ8N1N5 446 aa18.83■□□□□ 0.6
CLDND1-219ENST00000508659 ASAP3Q8TDY4 903 aa18.83■□□□□ 0.6
CLDND1-219ENST00000508659 ZNF689Q96CS4 500 aaPredicted RBP18.83■□□□□ 0.6
CLDND1-219ENST00000508659 BHMT2Q9H2M3 363 aa18.83■□□□□ 0.6
CLDND1-219ENST00000508659 CHST12Q9NRB3 414 aa18.83■□□□□ 0.6
CLDND1-219ENST00000508659 TMEM161AQ9NX61 479 aa18.83■□□□□ 0.6
CLDND1-219ENST00000508659 MTMR6Q9Y217 621 aa18.83■□□□□ 0.6
CLDND1-219ENST00000508659 LOXHD1Q8IVV2 1947 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 CHD7Q9P2D1 2997 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 RFXAPO00287 272 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 ERLIN2O94905 339 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 CDC25AP30304 524 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 CTNNB1P35222 781 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 GRB10Q13322 594 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 CAPSQ13938 189 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 SF3A1Q15459 793 aaKnown RBP18.82■□□□□ 0.6
CLDND1-219ENST00000508659 ZRSR1Q15695 479 aaKnown RBP18.82■□□□□ 0.6
CLDND1-219ENST00000508659 ECM1Q16610 540 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 FAM102BQ5T8I3 360 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 TWF2Q6IBS0 349 aaKnown RBP18.82■□□□□ 0.6
CLDND1-219ENST00000508659 PADI6Q6TGC4 694 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 MAEAQ7L5Y9 396 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 MICALL1Q8N3F8 863 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 CDK5RAP3Q96JB5 506 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 ELAC1Q9H777 363 aaKnown RBP18.82■□□□□ 0.6
CLDND1-219ENST00000508659 GPRC5CQ9NQ84 441 aa18.82■□□□□ 0.6
CLDND1-219ENST00000508659 HOXA2O43364 376 aa18.81■□□□□ 0.6
CLDND1-219ENST00000508659 ARL2P36404 184 aa18.81■□□□□ 0.6
CLDND1-219ENST00000508659 GATMP50440 423 aa18.81■□□□□ 0.6
CLDND1-219ENST00000508659 EPC2Q52LR7 807 aa18.81■□□□□ 0.6
CLDND1-219ENST00000508659 TMEM192Q8IY95 271 aa18.81■□□□□ 0.6
CLDND1-219ENST00000508659 RNF169Q8NCN4 708 aa18.81■□□□□ 0.6
CLDND1-219ENST00000508659 AK8Q96MA6 479 aa18.81■□□□□ 0.6
CLDND1-219ENST00000508659 ZSCAN16Q9H4T2 348 aaPredicted RBP18.81■□□□□ 0.6
CLDND1-219ENST00000508659 AGPAT5Q9NUQ2 364 aa18.81■□□□□ 0.6
CLDND1-219ENST00000508659 DNM3Q9UQ16 869 aa18.81■□□□□ 0.6
CLDND1-219ENST00000508659 COL6A3P12111 3177 aa18.81■□□□□ 0.6
CLDND1-219ENST00000508659 TTC3P53804 2025 aa18.8■□□□□ 0.6
CLDND1-219ENST00000508659 TBKBP1A7MCY6 615 aa18.8■□□□□ 0.6
CLDND1-219ENST00000508659 INO80B-WBP1J3KQ70 363 aa18.8■□□□□ 0.6
CLDND1-219ENST00000508659 FGFR1P11362 822 aa18.8■□□□□ 0.6
CLDND1-219ENST00000508659 GLRA2P23416 452 aa18.8■□□□□ 0.6
CLDND1-219ENST00000508659 PCBP1Q15365 356 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLDND1-219ENST00000508659 ECHDC2Q86YB7 292 aa18.8■□□□□ 0.6
CLDND1-219ENST00000508659 ABI1Q8IZP0 508 aa18.8■□□□□ 0.6
CLDND1-219ENST00000508659 MMTAG2Q9BU76 263 aaKnown RBP18.8■□□□□ 0.6
CLDND1-219ENST00000508659 NT5C3AQ9H0P0 336 aa18.8■□□□□ 0.6
CLDND1-219ENST00000508659 MINDY3Q9H8M7 445 aa18.8■□□□□ 0.6
CLDND1-219ENST00000508659 MRPL42Q9Y6G3 142 aaKnown RBP18.8■□□□□ 0.6
CLDND1-219ENST00000508659 A0A0U1RQF3 1178 aa18.79■□□□□ 0.6
CLDND1-219ENST00000508659 LRRIQ4A6NIV6 560 aa18.79■□□□□ 0.6
CLDND1-219ENST00000508659 E9PMD0 336 aa18.79■□□□□ 0.6
CLDND1-219ENST00000508659 EYA4O95677 639 aa18.79■□□□□ 0.6
CLDND1-219ENST00000508659 SKIP12755 728 aa18.79■□□□□ 0.6
CLDND1-219ENST00000508659 CYP11B2P19099 503 aa18.79■□□□□ 0.6
CLDND1-219ENST00000508659 RAB27AP51159 221 aa18.79■□□□□ 0.6
CLDND1-219ENST00000508659 PTENP60484 403 aa18.79■□□□□ 0.6
CLDND1-219ENST00000508659 POU5F1BQ06416 359 aa18.79■□□□□ 0.6
CLDND1-219ENST00000508659 RASSF8Q8NHQ8 419 aa18.79■□□□□ 0.6
CLDND1-219ENST00000508659 PPM1EQ8WY54 764 aa18.79■□□□□ 0.6
CLDND1-219ENST00000508659 CLP1Q92989 425 aaKnown RBP18.79■□□□□ 0.6
CLDND1-219ENST00000508659 C11orf84Q9BUA3 381 aaPredicted RBP18.79■□□□□ 0.6
CLDND1-219ENST00000508659 NFKBIZQ9BYH8 718 aa18.79■□□□□ 0.6
CLDND1-219ENST00000508659 LPXNO60711 386 aa18.78■□□□□ 0.6
CLDND1-219ENST00000508659 PDIA4P13667 645 aaKnown RBP18.78■□□□□ 0.6
CLDND1-219ENST00000508659 LONP1P36776 959 aaKnown RBP18.78■□□□□ 0.6
CLDND1-219ENST00000508659 FAM189BP81408 668 aa18.78■□□□□ 0.6
CLDND1-219ENST00000508659 MBTD1Q05BQ5 628 aa18.78■□□□□ 0.6
CLDND1-219ENST00000508659 NCBP1Q09161 790 aaKnown RBP18.78■□□□□ 0.6
CLDND1-219ENST00000508659 HYIQ5T013 277 aa18.78■□□□□ 0.6
CLDND1-219ENST00000508659 FAM173BQ6P4H8 233 aa18.78■□□□□ 0.6
CLDND1-219ENST00000508659 CABP7Q86V35 215 aa18.78■□□□□ 0.6
CLDND1-219ENST00000508659 IFNLR1Q8IU57 520 aaPredicted RBP18.78■□□□□ 0.6
CLDND1-219ENST00000508659 ZBTB8OSQ8IWT0 167 aa18.78■□□□□ 0.6
CLDND1-219ENST00000508659 TRAIPQ9BWF2 469 aa18.78■□□□□ 0.6
CLDND1-219ENST00000508659 TMEM117Q9H0C3 514 aa18.78■□□□□ 0.6
CLDND1-219ENST00000508659 CLIC4Q9Y696 253 aa18.78■□□□□ 0.6
CLDND1-219ENST00000508659 MTCH2Q9Y6C9 303 aa18.78■□□□□ 0.6
CLDND1-219ENST00000508659 EYSQ5T1H1 3165 aa18.78■□□□□ 0.6
CLDND1-219ENST00000508659 C5orf67F2Z3F1 127 aa18.77■□□□□ 0.6
CLDND1-219ENST00000508659 TSPAN1O60635 241 aa18.77■□□□□ 0.6
CLDND1-219ENST00000508659 LINC00271P0C7V0 271 aa18.77■□□□□ 0.6
CLDND1-219ENST00000508659 BMPR1AP36894 532 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms