RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 NUP62CLQ9H1M0 184 aa9.57□□□□□ -0.88
USP46-207ENST00000508499 C11orf49Q9H6J7 331 aa9.57□□□□□ -0.88
USP46-207ENST00000508499 SETD4Q9NVD3 440 aa9.57□□□□□ -0.88
USP46-207ENST00000508499 RMND1Q9NWS8 449 aa9.57□□□□□ -0.88
USP46-207ENST00000508499 LARSQ9P2J5 1176 aaKnown RBP9.57□□□□□ -0.88
USP46-207ENST00000508499 COL4A3BPQ9Y5P4 624 aa9.57□□□□□ -0.88
USP46-207ENST00000508499 SQORQ9Y6N5 450 aa9.57□□□□□ -0.88
USP46-207ENST00000508499 H0YCG3 227 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 SMC2O95347 1197 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 PLS3P13797 630 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 NAMPTP43490 491 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 CUL4BQ13620 913 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 ALCAMQ13740 583 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 GDF6Q6KF10 455 aaPredicted RBP9.56□□□□□ -0.88
USP46-207ENST00000508499 EFCAB12Q6NXP0 572 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 FOXR2Q6PJQ5 311 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 ZNF410Q86VK4 478 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 CCDC65Q8IXS2 484 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 KIAA0319LQ8IZA0 1049 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 CAGE1Q8TC20 777 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 PSPC1Q8WXF1 523 aaKnown RBP9.56□□□□□ -0.88
USP46-207ENST00000508499 ABHD8Q96I13 439 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 STRA6Q9BX79 667 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 PARVGQ9HBI0 331 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 KIAA1468Q9P260 1216 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 TREHO43280 583 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 TRAK2O60296 914 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 B4GALT4O60513 344 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 USO1O60763 962 aaKnown RBP9.56□□□□□ -0.88
USP46-207ENST00000508499 HIP1RO75146 1068 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 PPP1R37O75864 691 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 PARNO95453 639 aaKnown RBP9.56□□□□□ -0.88
USP46-207ENST00000508499 RPN1P04843 607 aaKnown RBP9.56□□□□□ -0.88
USP46-207ENST00000508499 PPP1R2P41236 205 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 AFMP43652 599 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 NCKAP1LP55160 1127 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 PTGISQ16647 500 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 TRIM71Q2Q1W2 868 aaKnown RBP9.56□□□□□ -0.88
USP46-207ENST00000508499 CT47A1Q5JQC4 288 aaPredicted RBP9.56□□□□□ -0.88
USP46-207ENST00000508499 FAM26DQ5JW98 314 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 CDCA2Q69YH5 1023 aaPredicted RBP9.56□□□□□ -0.88
USP46-207ENST00000508499 RSPH3Q86UC2 560 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 TMEM174Q8WUU8 243 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 TRAPPC12Q8WVT3 735 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 HVCN1Q96D96 273 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 PAWRQ96IZ0 340 aaKnown RBP9.56□□□□□ -0.88
USP46-207ENST00000508499 FIZ1Q96SL8 496 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 MAP7D2Q96T17 732 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 TMEM63CQ9P1W3 806 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 PCDHA5Q9Y5H7 936 aa9.56□□□□□ -0.88
USP46-207ENST00000508499 LTBP2Q14767 1821 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 UBE4BO95155 1302 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 EIF3DO15371 548 aaKnown RBP eCLIP9.55□□□□□ -0.88
USP46-207ENST00000508499 TLR3O15455 904 aaKnown RBP9.55□□□□□ -0.88
USP46-207ENST00000508499 TBCAO75347 108 aaKnown RBP9.55□□□□□ -0.88
USP46-207ENST00000508499 GPR32O75388 356 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 MYCP01106 439 aaPredicted RBP9.55□□□□□ -0.88
USP46-207ENST00000508499 SSBP05455 408 aaKnown RBP eCLIP9.55□□□□□ -0.88
USP46-207ENST00000508499 CYP2C9P11712 490 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 GLRA2P23416 452 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 EFNA5P52803 228 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 SMTNP53814 917 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 ASIC1P78348 528 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 DMP1Q13316 513 aaPredicted RBP9.55□□□□□ -0.88
USP46-207ENST00000508499 PNOCQ13519 176 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 TFDP1Q14186 410 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 FAM187BQ17R55 369 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 BMT2Q1RMZ1 405 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 CCDC155Q8N6L0 562 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 USP38Q8NB14 1042 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 PRPF31Q8WWY3 499 aaKnown RBP9.55□□□□□ -0.88
USP46-207ENST00000508499 SMARCE1Q969G3 411 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 CCDC47Q96A33 483 aaKnown RBP9.55□□□□□ -0.88
USP46-207ENST00000508499 SH2D3AQ9BRG2 576 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 SENP6Q9GZR1 1112 aaPredicted RBP9.55□□□□□ -0.88
USP46-207ENST00000508499 TMEM134Q9H6X4 195 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 PANK4Q9NVE7 773 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 ARHGAP28Q9P2N2 729 aa9.55□□□□□ -0.88
USP46-207ENST00000508499 A0A087WWV3 80 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 DCDC2CA8MYV0 355 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 FAM13AO94988 1023 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 KRT18P05783 430 aaKnown RBP9.54□□□□□ -0.88
USP46-207ENST00000508499 NPTX2P47972 431 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 GPC3P51654 580 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 PTENP60484 403 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 GTF2BQ00403 316 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 MGAT3Q09327 533 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 LAMTOR4Q0VGL1 99 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 COASYQ13057 564 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 DRP2Q13474 957 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 MORC3Q14149 939 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 KMT5BQ4FZB7 885 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 FAM102BQ5T8I3 360 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 ZNF658Q5TYW1 1059 aaPredicted RBP9.54□□□□□ -0.88
USP46-207ENST00000508499 STXBP4Q6ZWJ1 553 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 EPM2AIP1Q7L775 607 aaPredicted RBP9.54□□□□□ -0.88
USP46-207ENST00000508499 DYMQ7RTS9 669 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 ZNF720Q7Z2F6 126 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 SRGAP1Q7Z6B7 1085 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 GRAMD1CQ8IYS0 662 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms