RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 ZNF76P36508 570 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 MRPL12P52815 198 aaKnown RBP8.91□□□□□ -0.98
SH3D19-208ENST00000508492 SP4Q02446 784 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 SPEM2Q0P670 501 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 PPIGQ13427 754 aaKnown RBP eCLIP8.91□□□□□ -0.982e-7■□□□□ 11.1
SH3D19-208ENST00000508492 TCTN1Q2MV58 587 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 RASIP1Q5U651 963 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 Q6ZUG5 572 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 OTOP2Q7RTS6 562 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 HEATR3Q7Z4Q2 680 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 DEFB128Q7Z7B8 93 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 DHX37Q8IY37 1157 aaKnown RBP8.91□□□□□ -0.98
SH3D19-208ENST00000508492 SMARCC2Q8TAQ2 1214 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 DHX38Q92620 1227 aaKnown RBP8.91□□□□□ -0.98
SH3D19-208ENST00000508492 ZNF837Q96EG3 531 aaPredicted RBP8.91□□□□□ -0.98
SH3D19-208ENST00000508492 MAF1Q9H063 256 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 IL23AQ9NPF7 189 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 HDAC6Q9UBN7 1215 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 FAM8A1Q9UBU6 413 aa8.91□□□□□ -0.98
SH3D19-208ENST00000508492 SEC63Q9UGP8 760 aaKnown RBP8.91□□□□□ -0.98
SH3D19-208ENST00000508492 NAP1L2Q9ULW6 460 aaPredicted RBP8.91□□□□□ -0.98
SH3D19-208ENST00000508492 HAS3O00219 553 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 BNIP3LO60238 219 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 GADD45BO75293 160 aaPredicted RBP8.9□□□□□ -0.98
SH3D19-208ENST00000508492 MAP3K6O95382 1288 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 F2P00734 622 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 CALM1P0DP23 149 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 CALM2P0DP24 149 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 CALM3P0DP25 149 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 SMARCA1P28370 1054 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 ERCC5P28715 1186 aaPredicted RBP8.9□□□□□ -0.98
SH3D19-208ENST00000508492 SOX18P35713 384 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 GNAQP50148 359 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 FANCCQ00597 558 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 CELF3Q5SZQ8 465 aaKnown RBP8.9□□□□□ -0.98
SH3D19-208ENST00000508492 NFRKBQ6P4R8 1299 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 KRT25Q7Z3Z0 450 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 TMTC2Q8N394 836 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 TMEM199Q8N511 208 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 PPTC7Q8NI37 304 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 MYLIPQ8WY64 445 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 BRF1Q92994 677 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 RNF34Q969K3 372 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 SPATA33Q96N06 139 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 INPP4AQ96PE3 977 aaPredicted RBP8.9□□□□□ -0.98
SH3D19-208ENST00000508492 OSBPL7Q9BZF2 842 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 SUV39H2Q9H5I1 410 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 TMEM260Q9NX78 707 aa8.9□□□□□ -0.98
SH3D19-208ENST00000508492 MAP3K20Q9NYL2 800 aaKnown RBP8.9□□□□□ -0.98
SH3D19-208ENST00000508492 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.9□□□□□ -0.98
SH3D19-208ENST00000508492 EYSQ5T1H1 3165 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 STXBP3O00186 592 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 MMP20O60882 483 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 ATP9AO75110 1047 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 PSAPP07602 524 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 HOXD8P13378 290 aaPredicted RBP8.89□□□□□ -0.99
SH3D19-208ENST00000508492 MYOGP15173 224 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 NFKB1P19838 968 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 CASTP20810 708 aaKnown RBP8.89□□□□□ -0.99
SH3D19-208ENST00000508492 RPS6KB1P23443 525 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 TARSP26639 723 aaKnown RBP8.89□□□□□ -0.99
SH3D19-208ENST00000508492 ICAM3P32942 547 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 RABGGTBP53611 331 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 SMAD3P84022 425 aaKnown RBP8.89□□□□□ -0.99
SH3D19-208ENST00000508492 GPNMBQ14956 572 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 PTGISQ16647 500 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 DGKDQ16760 1214 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 KIAA0753Q2KHM9 967 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 PSRC1Q6PGN9 363 aaPredicted RBP8.89□□□□□ -0.99
SH3D19-208ENST00000508492 FOXR1Q6PIV2 292 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 CYFIP1Q7L576 1253 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 SAMD3Q8N6K7 520 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 ABHD17AQ96GS6 310 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 UIMC1Q96RL1 719 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 CDX2Q99626 313 aaPredicted RBP8.89□□□□□ -0.99
SH3D19-208ENST00000508492 LZTS2Q9BRK4 669 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 C16orf70Q9BSU1 422 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 PBX4Q9BYU1 374 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 SEMA6BQ9H3T3 888 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 PSTPIP2Q9H939 334 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 CUEDC1Q9NWM3 386 aaPredicted RBP8.89□□□□□ -0.99
SH3D19-208ENST00000508492 GTF2IRD1Q9UHL9 959 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 PCDHA6Q9UN73 950 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 YBX2Q9Y2T7 364 aaKnown RBP8.89□□□□□ -0.99
SH3D19-208ENST00000508492 PCDHA8Q9Y5H6 950 aa8.89□□□□□ -0.99
SH3D19-208ENST00000508492 TCF20Q9UGU0 1960 aaKnown RBP8.89□□□□□ -0.99
SH3D19-208ENST00000508492 NID2Q14112 1375 aa8.88□□□□□ -0.99
SH3D19-208ENST00000508492 KPNA6O60684 536 aa8.88□□□□□ -0.99
SH3D19-208ENST00000508492 ARHGEF15O94989 841 aa8.88□□□□□ -0.99
SH3D19-208ENST00000508492 LGALS2P05162 132 aa8.88□□□□□ -0.99
SH3D19-208ENST00000508492 CTSHP09668 335 aa8.88□□□□□ -0.99
SH3D19-208ENST00000508492 IQCF3P0C7M6 154 aa8.88□□□□□ -0.99
SH3D19-208ENST00000508492 KCNA2P16389 499 aa8.88□□□□□ -0.99
SH3D19-208ENST00000508492 ITGB5P18084 799 aa8.88□□□□□ -0.99
SH3D19-208ENST00000508492 NAPAP54920 295 aa8.88□□□□□ -0.99
SH3D19-208ENST00000508492 CCT2P78371 535 aaKnown RBP8.88□□□□□ -0.99
SH3D19-208ENST00000508492 TOB2Q14106 344 aaPredicted RBP8.88□□□□□ -0.99
SH3D19-208ENST00000508492 KRT32Q14532 448 aa8.88□□□□□ -0.99
SH3D19-208ENST00000508492 MBTPS1Q14703 1052 aa8.88□□□□□ -0.99
SH3D19-208ENST00000508492 GRIN2CQ14957 1233 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms