RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 KIAA1024Q9UPX6 916 aa16.76■□□□□ 0.27
TRIO-211ENST00000508343 ADGRA3Q8IWK6 1321 aa16.75■□□□□ 0.27
TRIO-211ENST00000508343 TRANK1O15050 2925 aa16.75■□□□□ 0.27
TRIO-211ENST00000508343 IBSPP21815 317 aaPredicted RBP16.75■□□□□ 0.27
TRIO-211ENST00000508343 ARL2P36404 184 aa16.75■□□□□ 0.27
TRIO-211ENST00000508343 POU5F1BQ06416 359 aa16.75■□□□□ 0.27
TRIO-211ENST00000508343 GRB10Q13322 594 aa16.75■□□□□ 0.27
TRIO-211ENST00000508343 EPC2Q52LR7 807 aa16.75■□□□□ 0.27
TRIO-211ENST00000508343 CATSPER4Q7RTX7 472 aa16.75■□□□□ 0.27
TRIO-211ENST00000508343 TMEM192Q8IY95 271 aa16.75■□□□□ 0.27
TRIO-211ENST00000508343 RNF149Q8NC42 400 aa16.75■□□□□ 0.27
TRIO-211ENST00000508343 SNX29Q8TEQ0 813 aa16.75■□□□□ 0.27
TRIO-211ENST00000508343 TMEM161AQ9NX61 479 aa16.75■□□□□ 0.27
TRIO-211ENST00000508343 DACT1Q9NYF0 836 aa16.75■□□□□ 0.27
TRIO-211ENST00000508343 ARHGEF35A5YM69 484 aa16.74■□□□□ 0.27
TRIO-211ENST00000508343 GTPBP6O43824 516 aaPredicted RBP16.74■□□□□ 0.27
TRIO-211ENST00000508343 LPXNO60711 386 aa16.74■□□□□ 0.27
TRIO-211ENST00000508343 USO1O60763 962 aaKnown RBP16.74■□□□□ 0.27
TRIO-211ENST00000508343 BMP15O95972 392 aa16.74■□□□□ 0.27
TRIO-211ENST00000508343 TFDP1Q14186 410 aa16.74■□□□□ 0.27
TRIO-211ENST00000508343 CMTR2Q8IYT2 770 aaKnown RBP16.74■□□□□ 0.27
TRIO-211ENST00000508343 MCPH1Q8NEM0 835 aa16.74■□□□□ 0.27
TRIO-211ENST00000508343 FBXO22Q8NEZ5 403 aa16.74■□□□□ 0.27
TRIO-211ENST00000508343 CLP1Q92989 425 aaKnown RBP16.74■□□□□ 0.27
TRIO-211ENST00000508343 DDX19AQ9NUU7 478 aaKnown RBP16.74■□□□□ 0.27
TRIO-211ENST00000508343 RWDD3Q9Y3V2 267 aa16.74■□□□□ 0.27
TRIO-211ENST00000508343 MTCH2Q9Y6C9 303 aa16.74■□□□□ 0.27
TRIO-211ENST00000508343 COL4A6Q14031 1691 aa16.74■□□□□ 0.27
TRIO-211ENST00000508343 A0A0U1RQF3 1178 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 VWA3AA6NCI4 1184 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 PP2D1A8MPX8 630 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 CYP11B2P19099 503 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 CDC25AP30304 524 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 BMPR1AP36894 532 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 PHKA2P46019 1235 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 PTENP60484 403 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 FAM102BQ5T8I3 360 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 PADI6Q6TGC4 694 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 MAEAQ7L5Y9 396 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 ASAP3Q8TDY4 903 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 GDPD5Q8WTR4 605 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 MMTAG2Q9BU76 263 aaKnown RBP16.73■□□□□ 0.27
TRIO-211ENST00000508343 TRAIPQ9BWF2 469 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 POLR3FQ9H1D9 316 aaPredicted RBP16.73■□□□□ 0.27
TRIO-211ENST00000508343 MINDY3Q9H8M7 445 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 LMCD1Q9NZU5 365 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 DNM3Q9UQ16 869 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 MTMR6Q9Y217 621 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 PIN4Q9Y237 131 aaKnown RBP16.73■□□□□ 0.27
TRIO-211ENST00000508343 ARID2Q68CP9 1835 aa16.73■□□□□ 0.27
TRIO-211ENST00000508343 STX6O43752 255 aa16.72■□□□□ 0.27
TRIO-211ENST00000508343 EOMESO95936 686 aa16.72■□□□□ 0.27
TRIO-211ENST00000508343 RB1P06400 928 aa16.72■□□□□ 0.27
TRIO-211ENST00000508343 LINC00271P0C7V0 271 aa16.72■□□□□ 0.27
TRIO-211ENST00000508343 GLRA2P23416 452 aa16.72■□□□□ 0.27
TRIO-211ENST00000508343 GATMP50440 423 aa16.72■□□□□ 0.27
TRIO-211ENST00000508343 RESTQ13127 1097 aa16.72■□□□□ 0.27
TRIO-211ENST00000508343 PCBP1Q15365 356 aaKnown RBP eCLIP16.72■□□□□ 0.27
TRIO-211ENST00000508343 SF3A1Q15459 793 aaKnown RBP16.72■□□□□ 0.27
TRIO-211ENST00000508343 PAN2Q504Q3 1202 aaKnown RBP16.72■□□□□ 0.27
TRIO-211ENST00000508343 ECHDC2Q86YB7 292 aa16.72■□□□□ 0.27
TRIO-211ENST00000508343 IFNLR1Q8IU57 520 aaPredicted RBP16.72■□□□□ 0.27
TRIO-211ENST00000508343 SLC17A8Q8NDX2 589 aa16.72■□□□□ 0.27
TRIO-211ENST00000508343 PPM1EQ8WY54 764 aa16.72■□□□□ 0.27
TRIO-211ENST00000508343 BHMT2Q9H2M3 363 aa16.72■□□□□ 0.27
TRIO-211ENST00000508343 MRPL42Q9Y6G3 142 aaKnown RBP16.72■□□□□ 0.27
TRIO-211ENST00000508343 EYSQ5T1H1 3165 aa16.72■□□□□ 0.27
TRIO-211ENST00000508343 TBKBP1A7MCY6 615 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 C5orf67F2Z3F1 127 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 H3BNC9 293 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 HOXA2O43364 376 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 EYA4O95677 639 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 HSP90AA1P07900 732 aaKnown RBP16.71■□□□□ 0.27
TRIO-211ENST00000508343 FGFR1P11362 822 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 SKIP12755 728 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 CTNNB1P35222 781 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 GPM6BQ13491 265 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 CAPSQ13938 189 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 CCDC85BQ15834 202 aaPredicted RBP16.71■□□□□ 0.27
TRIO-211ENST00000508343 TWF2Q6IBS0 349 aaKnown RBP16.71■□□□□ 0.27
TRIO-211ENST00000508343 ZNF598Q86UK7 904 aaKnown RBP16.71■□□□□ 0.27
TRIO-211ENST00000508343 KCTD17Q8N5Z5 321 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 AK8Q96MA6 479 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 PLVAPQ9BX97 442 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 NFKBIZQ9BYH8 718 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 ZSCAN16Q9H4T2 348 aaPredicted RBP16.71■□□□□ 0.27
TRIO-211ENST00000508343 GPRC5CQ9NQ84 441 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 AGPAT5Q9NUQ2 364 aa16.71■□□□□ 0.27
TRIO-211ENST00000508343 E9PMD0 336 aa16.7■□□□□ 0.26
TRIO-211ENST00000508343 INO80B-WBP1J3KQ70 363 aa16.7■□□□□ 0.26
TRIO-211ENST00000508343 PDIA4P13667 645 aaKnown RBP16.7■□□□□ 0.26
TRIO-211ENST00000508343 HOXA11P31270 313 aaPredicted RBP16.7■□□□□ 0.26
TRIO-211ENST00000508343 NCBP1Q09161 790 aaKnown RBP16.7■□□□□ 0.26
TRIO-211ENST00000508343 ZRSR1Q15695 479 aaKnown RBP16.7■□□□□ 0.26
TRIO-211ENST00000508343 HYIQ5T013 277 aa16.7■□□□□ 0.26
TRIO-211ENST00000508343 MICALL1Q8N3F8 863 aa16.7■□□□□ 0.26
TRIO-211ENST00000508343 RNF169Q8NCN4 708 aa16.7■□□□□ 0.26
TRIO-211ENST00000508343 TMEM117Q9H0C3 514 aa16.7■□□□□ 0.26
TRIO-211ENST00000508343 PRRC2BQ5JSZ5 2229 aaKnown RBP16.7■□□□□ 0.26
TRIO-211ENST00000508343 SPTBN5Q9NRC6 3674 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms