RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 SEPT12Q8IYM1 358 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 BAP1Q92560 729 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 ANKS1AQ92625 1134 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 NKX1-2Q9UD57 310 aaPredicted RBP13.72□□□□□ -0.21
DDR1-262ENST00000508312 TTC36A6NLP5 189 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 E9PMD0 336 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 SNX3O60493 162 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 TOM1O60784 492 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 CUL3Q13618 768 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 SV2BQ7L1I2 683 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 TEX9Q8N6V9 391 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 NEDD1Q8NHV4 660 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 TLCD1Q96CP7 247 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 SYT15Q9BQS2 421 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 LSM14BQ9BX40 385 aaKnown RBP13.72□□□□□ -0.21
DDR1-262ENST00000508312 KCNMB3Q9NPA1 279 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 BLOC1S4Q9NUP1 217 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 GPR75-ASB3A0A0A6YYF3 556 aa13.71□□□□□ -0.21
DDR1-262ENST00000508312 CCDC169A6NNP5 214 aa13.71□□□□□ -0.21
DDR1-262ENST00000508312 LDHCP07864 332 aa13.71□□□□□ -0.21
DDR1-262ENST00000508312 MYBP10242 640 aa13.71□□□□□ -0.21
DDR1-262ENST00000508312 GNAQP50148 359 aa13.71□□□□□ -0.21
DDR1-262ENST00000508312 ZNF131P52739 623 aa13.71□□□□□ -0.21
DDR1-262ENST00000508312 EIF3BP55884 814 aaKnown RBP13.71□□□□□ -0.21
DDR1-262ENST00000508312 IKQ13123 557 aaPredicted RBP13.71□□□□□ -0.21
DDR1-262ENST00000508312 ADGRF4Q8IZF3 695 aa13.71□□□□□ -0.21
DDR1-262ENST00000508312 GALNT15Q8N3T1 639 aa13.71□□□□□ -0.21
DDR1-262ENST00000508312 GDAP1Q8TB36 358 aa13.71□□□□□ -0.21
DDR1-262ENST00000508312 NEK9Q8TD19 979 aa13.71□□□□□ -0.21
DDR1-262ENST00000508312 PNMA5Q96PV4 448 aa13.71□□□□□ -0.21
DDR1-262ENST00000508312 KCNK9Q9NPC2 374 aa13.71□□□□□ -0.21
DDR1-262ENST00000508312 SSU72P8A0A1W2PR75 194 aa13.71□□□□□ -0.22
DDR1-262ENST00000508312 GCLCP48506 637 aaPredicted RBP13.71□□□□□ -0.22
DDR1-262ENST00000508312 MRPS35P82673 323 aaKnown RBP13.71□□□□□ -0.22
DDR1-262ENST00000508312 MUM1Q2TAK8 710 aa13.71□□□□□ -0.22
DDR1-262ENST00000508312 HGSNATQ68CP4 663 aa13.71□□□□□ -0.22
DDR1-262ENST00000508312 PEX26Q7Z412 305 aa13.71□□□□□ -0.22
DDR1-262ENST00000508312 KSR1Q8IVT5 923 aa13.71□□□□□ -0.22
DDR1-262ENST00000508312 METTL13Q8N6R0 699 aa13.71□□□□□ -0.22
DDR1-262ENST00000508312 ZNF513Q8N8E2 541 aaPredicted RBP13.71□□□□□ -0.22
DDR1-262ENST00000508312 DDX12PQ92771 950 aa13.71□□□□□ -0.22
DDR1-262ENST00000508312 CENPTQ96BT3 561 aa13.71□□□□□ -0.22
DDR1-262ENST00000508312 IQCDQ96DY2 449 aa13.71□□□□□ -0.22
DDR1-262ENST00000508312 MTMR4Q9NYA4 1195 aa13.71□□□□□ -0.22
DDR1-262ENST00000508312 DBR1Q9UK59 544 aaKnown RBP13.71□□□□□ -0.22
DDR1-262ENST00000508312 BCS1LQ9Y276 419 aa13.71□□□□□ -0.22
DDR1-262ENST00000508312 LAMB2P55268 1798 aa13.71□□□□□ -0.22
DDR1-262ENST00000508312 RNF8O76064 485 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 SERPING1P05155 500 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 FAM83BQ5T0W9 1011 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 EPS8L3Q8TE67 593 aaKnown RBP13.7□□□□□ -0.22
DDR1-262ENST00000508312 GORASP1Q9BQQ3 440 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.7□□□□□ -0.223e-6■■■■□ 19.3
DDR1-262ENST00000508312 TRIM7Q9C029 511 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 ALDH3A1P30838 453 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 KLC1Q07866 573 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 ADCY1Q08828 1119 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 ADAM9Q13443 819 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 SLC29A2Q14542 456 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 ASTE1Q2TB18 679 aaPredicted RBP13.7□□□□□ -0.22
DDR1-262ENST00000508312 RC3H1Q5TC82 1133 aaKnown RBP13.7□□□□□ -0.22
DDR1-262ENST00000508312 SPATA21Q7Z572 469 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 CCDC25Q86WR0 208 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 LARP4BQ92615 738 aaKnown RBP13.7□□□□□ -0.22
DDR1-262ENST00000508312 JMJD4Q9H9V9 463 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 LMCD1Q9NZU5 365 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 PYGBP11216 843 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 EPS15P42566 896 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 ADCY7P51828 1080 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 PMS2P54278 862 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 UBXN2AP68543 259 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 TSNAXIP1Q2TAA8 658 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 FAM47EQ6ZV65 393 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 SCFD2Q8WU76 684 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 PBKQ96KB5 322 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 FAM114A2Q9NRY5 505 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 SNX24Q9Y343 169 aa13.7□□□□□ -0.22
DDR1-262ENST00000508312 POTEB3A0JP26 581 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 POTECB2RU33 542 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 TLR2O60603 784 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 FLOT1O75955 427 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 KRT18P05783 430 aaKnown RBP13.69□□□□□ -0.22
DDR1-262ENST00000508312 GNA11P29992 359 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 HOXA13P31271 388 aaPredicted RBP13.69□□□□□ -0.22
DDR1-262ENST00000508312 MMP13P45452 471 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 PPP4CP60510 307 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 CYP4A11Q02928 519 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 SLC18A3Q16572 532 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 POTEBQ6S5H4 581 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 KRT25Q7Z3Z0 450 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 FITM2Q8N6M3 262 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 GBP7Q8N8V2 638 aaPredicted RBP13.69□□□□□ -0.22
DDR1-262ENST00000508312 NUDCD1Q96RS6 583 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 CCSER1Q9C0I3 900 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.69□□□□□ -0.228e-8■■■■□ 25.6
DDR1-262ENST00000508312 CHCHD3Q9NX63 227 aaKnown RBP13.69□□□□□ -0.22
DDR1-262ENST00000508312 TMEM59LQ9UK28 342 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 FGGP02679 453 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 BNIP1Q12981 228 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 CNNM4Q6P4Q7 775 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms