RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 PTCRAQ6ISU1 281 aaPredicted RBP15.99■□□□□ 0.15
RAB28-205ENST00000508274 LRRC55Q6ZSA7 311 aa15.99■□□□□ 0.15
RAB28-205ENST00000508274 C4orf19Q8IY42 314 aa15.99■□□□□ 0.15
RAB28-205ENST00000508274 SLFN12Q8IYM2 578 aa15.99■□□□□ 0.15
RAB28-205ENST00000508274 COLGALT1Q8NBJ5 622 aa15.99■□□□□ 0.15
RAB28-205ENST00000508274 CASD1Q96PB1 797 aa15.99■□□□□ 0.15
RAB28-205ENST00000508274 GCOM2Q9BZD3 368 aaPredicted RBP15.99■□□□□ 0.15
RAB28-205ENST00000508274 CD320Q9NPF0 282 aa15.99■□□□□ 0.15
RAB28-205ENST00000508274 LINC01565O15544 149 aa15.98■□□□□ 0.15
RAB28-205ENST00000508274 BAG4O95429 457 aaKnown RBP15.98■□□□□ 0.15
RAB28-205ENST00000508274 YWHABP31946 246 aaKnown RBP15.98■□□□□ 0.15
RAB28-205ENST00000508274 PBX3P40426 434 aa15.98■□□□□ 0.15
RAB28-205ENST00000508274 CALCRLQ16602 461 aa15.98■□□□□ 0.15
RAB28-205ENST00000508274 CTC1Q2NKJ3 1217 aa15.98■□□□□ 0.15
RAB28-205ENST00000508274 ZNF410Q86VK4 478 aa15.98■□□□□ 0.15
RAB28-205ENST00000508274 KHSRPQ92945 711 aaKnown RBP eCLIP15.98■□□□□ 0.154e-7■■■□□ 18.6
RAB28-205ENST00000508274 TMEM143Q96AN5 459 aa15.98■□□□□ 0.15
RAB28-205ENST00000508274 IGFLR1Q9H665 355 aa15.98■□□□□ 0.15
RAB28-205ENST00000508274 DHX33Q9H6R0 707 aaKnown RBP15.98■□□□□ 0.15
RAB28-205ENST00000508274 A0A0U1RQF3 1178 aa15.97■□□□□ 0.15
RAB28-205ENST00000508274 NEMFO60524 1076 aa15.97■□□□□ 0.15
RAB28-205ENST00000508274 DKC1O60832 514 aaKnown RBP eCLIP15.97■□□□□ 0.15
RAB28-205ENST00000508274 TBX10O75333 385 aa15.97■□□□□ 0.15
RAB28-205ENST00000508274 POLGP54098 1239 aaPredicted RBP15.97■□□□□ 0.15
RAB28-205ENST00000508274 CLUL1Q15846 466 aa15.97■□□□□ 0.15
RAB28-205ENST00000508274 ZNF598Q86UK7 904 aaKnown RBP15.97■□□□□ 0.15
RAB28-205ENST00000508274 SLC7A3Q8WY07 619 aa15.97■□□□□ 0.15
RAB28-205ENST00000508274 EIF2AK1Q9BQI3 630 aaKnown RBP15.97■□□□□ 0.15
RAB28-205ENST00000508274 TMEM117Q9H0C3 514 aa15.97■□□□□ 0.15
RAB28-205ENST00000508274 TMEM60Q9H2L4 133 aa15.97■□□□□ 0.15
RAB28-205ENST00000508274 TTC12Q9H892 705 aaPredicted RBP15.97■□□□□ 0.15
RAB28-205ENST00000508274 IFT122Q9HBG6 1241 aa15.97■□□□□ 0.15
RAB28-205ENST00000508274 PCDHB12Q9Y5F1 795 aa15.97■□□□□ 0.15
RAB28-205ENST00000508274 COL4A3BPQ9Y5P4 624 aa15.97■□□□□ 0.15
RAB28-205ENST00000508274 GRXCR2A6NFK2 248 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 FGF18O76093 207 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 SLITRK3O94933 977 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 ATP2B1P20020 1258 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 SFPQP23246 707 aaKnown RBP eCLIP15.96■□□□□ 0.15
RAB28-205ENST00000508274 TXKP42681 527 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 CDC42EP1Q00587 391 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 EMC2Q15006 297 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 LONRF3Q496Y0 759 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 XKR9Q5GH70 373 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 TPH2Q8IWU9 490 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 THNSL1Q8IYQ7 743 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 ABI1Q8IZP0 508 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 MTMR9Q96QG7 549 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 JPH2Q9BR39 696 aaPredicted RBP15.96■□□□□ 0.15
RAB28-205ENST00000508274 ZSWIM4Q9H7M6 989 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 PCDHA12Q9UN75 941 aa15.96■□□□□ 0.15
RAB28-205ENST00000508274 PIN4Q9Y237 131 aaKnown RBP15.96■□□□□ 0.15
RAB28-205ENST00000508274 POTEMA6NI47 508 aa15.96■□□□□ 0.14
RAB28-205ENST00000508274 HOXA2O43364 376 aa15.96■□□□□ 0.14
RAB28-205ENST00000508274 LAG3P18627 525 aa15.96■□□□□ 0.14
RAB28-205ENST00000508274 RFC5P40937 340 aa15.96■□□□□ 0.14
RAB28-205ENST00000508274 RBM23Q86U06 439 aaKnown RBP15.96■□□□□ 0.14
RAB28-205ENST00000508274 FAM178BQ8IXR5 827 aa15.96■□□□□ 0.14
RAB28-205ENST00000508274 LRRC43Q8N309 656 aa15.96■□□□□ 0.14
RAB28-205ENST00000508274 HELQQ8TDG4 1101 aa15.96■□□□□ 0.14
RAB28-205ENST00000508274 PRPF31Q8WWY3 499 aaKnown RBP15.96■□□□□ 0.14
RAB28-205ENST00000508274 PSPC1Q8WXF1 523 aaKnown RBP15.96■□□□□ 0.14
RAB28-205ENST00000508274 LPPQ93052 612 aa15.96■□□□□ 0.14
RAB28-205ENST00000508274 C8orf76Q96K31 380 aa15.96■□□□□ 0.14
RAB28-205ENST00000508274 MINDY3Q9H8M7 445 aa15.96■□□□□ 0.14
RAB28-205ENST00000508274 AAASQ9NRG9 546 aa15.96■□□□□ 0.14
RAB28-205ENST00000508274 DACT1Q9NYF0 836 aa15.96■□□□□ 0.14
RAB28-205ENST00000508274 A0A087WWV3 80 aa15.95■□□□□ 0.14
RAB28-205ENST00000508274 MEIS3P2A8K0S8 358 aa15.95■□□□□ 0.14
RAB28-205ENST00000508274 NCK2O43639 380 aa15.95■□□□□ 0.14
RAB28-205ENST00000508274 SRGAP2CP0DJJ0 459 aa15.95■□□□□ 0.14
RAB28-205ENST00000508274 MCM7P33993 719 aa15.95■□□□□ 0.14
RAB28-205ENST00000508274 PHKA2P46019 1235 aa15.95■□□□□ 0.14
RAB28-205ENST00000508274 LAMTOR4Q0VGL1 99 aa15.95■□□□□ 0.14
RAB28-205ENST00000508274 TWF2Q6IBS0 349 aaKnown RBP15.95■□□□□ 0.14
RAB28-205ENST00000508274 OTUD6AQ7L8S5 288 aa15.95■□□□□ 0.14
RAB28-205ENST00000508274 CATSPER4Q7RTX7 472 aa15.95■□□□□ 0.14
RAB28-205ENST00000508274 HSD17B14Q9BPX1 270 aa15.95■□□□□ 0.14
RAB28-205ENST00000508274 INO80BQ9C086 356 aaPredicted RBP15.95■□□□□ 0.14
RAB28-205ENST00000508274 XPNPEP1Q9NQW7 623 aa15.95■□□□□ 0.14
RAB28-205ENST00000508274 TLR9Q9NR96 1032 aa15.95■□□□□ 0.14
RAB28-205ENST00000508274 PPME1Q9Y570 386 aa15.95■□□□□ 0.14
RAB28-205ENST00000508274 EOMESO95936 686 aa15.94■□□□□ 0.14
RAB28-205ENST00000508274 NRIP1P48552 1158 aa15.94■□□□□ 0.14
RAB28-205ENST00000508274 ERVFC1P60507 584 aa15.94■□□□□ 0.14
RAB28-205ENST00000508274 SAFBQ15424 915 aaKnown RBP eCLIP15.94■□□□□ 0.14
RAB28-205ENST00000508274 KCNT2Q6UVM3 1135 aa15.94■□□□□ 0.14
RAB28-205ENST00000508274 MTRQ99707 1265 aa15.94■□□□□ 0.14
RAB28-205ENST00000508274 LLPHQ9BRT6 129 aaKnown RBP15.94■□□□□ 0.14
RAB28-205ENST00000508274 EPHX3Q9H6B9 360 aa15.94■□□□□ 0.14
RAB28-205ENST00000508274 CHST12Q9NRB3 414 aa15.94■□□□□ 0.14
RAB28-205ENST00000508274 AGPAT5Q9NUQ2 364 aa15.94■□□□□ 0.14
RAB28-205ENST00000508274 FAM105AQ9NUU6 356 aa15.94■□□□□ 0.14
RAB28-205ENST00000508274 PER2O15055 1255 aa15.93■□□□□ 0.14
RAB28-205ENST00000508274 GLP2RO95838 553 aa15.93■□□□□ 0.14
RAB28-205ENST00000508274 RBM10P98175 930 aaKnown RBP15.93■□□□□ 0.14
RAB28-205ENST00000508274 UBE3AQ05086 875 aa15.93■□□□□ 0.14
RAB28-205ENST00000508274 ADAM15Q13444 863 aa15.93■□□□□ 0.14
RAB28-205ENST00000508274 FERMT3Q86UX7 667 aa15.93■□□□□ 0.14
RAB28-205ENST00000508274 RNF149Q8NC42 400 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms