RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 ITGB8P26012 769 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 SHMT1P34896 483 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 EPHB4P54760 987 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 CLCQ05315 142 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 GABPAQ06546 454 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 OS9Q13438 667 aaPredicted RBP8.06□□□□□ -1.12
NR1I3-224ENST00000507215 TMEM240Q5SV17 173 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 PRAMEF13Q5VWM6 474 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 ANO1Q5XXA6 986 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 MAMDC4Q6UXC1 1216 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 ADGRA1Q86SQ6 560 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 AMOTL1Q8IY63 956 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 FAM9BQ8IZU0 186 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 MAGEB6Q8N7X4 407 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 KLHDC9Q8NEP7 349 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.06□□□□□ -1.12
NR1I3-224ENST00000507215 CRNKL1Q9BZJ0 848 aaKnown RBP8.06□□□□□ -1.12
NR1I3-224ENST00000507215 PRDM12Q9H4Q4 367 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 VCPKMTQ9H867 229 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 REV1Q9UBZ9 1251 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 RNF112Q9ULX5 631 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 ADAMTS5Q9UNA0 930 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 TMX2Q9Y320 296 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 CHD9Q3L8U1 2897 aa8.06□□□□□ -1.12
NR1I3-224ENST00000507215 SYNRGQ9UMZ2 1314 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 ZNFX1Q9P2E3 1918 aaKnown RBP8.05□□□□□ -1.12
NR1I3-224ENST00000507215 ARVCFO00192 962 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 MPHOSPH10O00566 681 aaKnown RBP8.05□□□□□ -1.12
NR1I3-224ENST00000507215 ERC2O15083 957 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 IDH1O75874 414 aaKnown RBP8.05□□□□□ -1.12
NR1I3-224ENST00000507215 LRIG2O94898 1065 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 HTR3BO95264 441 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 CST3P01034 146 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-224ENST00000507215 ZNF865P0CJ78 1059 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-224ENST00000507215 POU3F3P20264 500 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-224ENST00000507215 STAT3P40763 770 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 CDK7P50613 346 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 APOBRQ0VD83 1088 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 PAK2Q13177 524 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 SEPT2Q15019 361 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 SHROOM1Q2M3G4 852 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-224ENST00000507215 ZNF792Q3KQV3 632 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 SLITRK4Q8IW52 837 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 MRPL41Q8IXM3 137 aaKnown RBP8.05□□□□□ -1.12
NR1I3-224ENST00000507215 RPUSD2Q8IZ73 545 aaKnown RBP8.05□□□□□ -1.12
NR1I3-224ENST00000507215 ZNF654Q8IZM8 581 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 KCT2Q8NC54 265 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 TMEM87BQ96K49 555 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 HEXIM2Q96MH2 286 aaKnown RBP8.05□□□□□ -1.12
NR1I3-224ENST00000507215 OSBPL1AQ9BXW6 950 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 FOXQ1Q9C009 403 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 ACBD3Q9H3P7 528 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 IL23AQ9NPF7 189 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 PCDHB14Q9Y5E9 798 aa8.05□□□□□ -1.12
NR1I3-224ENST00000507215 PLXNA1Q9UIW2 1896 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 CHURC1-FNTBB4DL54 471 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 EOMESO95936 686 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 FGBP02675 491 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 GUCY1A2P33402 732 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 NKX3-2P78367 333 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 ICA1Q05084 483 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 TMEM132BQ14DG7 1078 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 KCNA10Q16322 511 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 TMEM31Q5JXX7 168 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 TMEM201Q5SNT2 666 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 ZMYM1Q5SVZ6 1142 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 PRAMEF19Q5SWL8 479 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 CCSAPQ6IQ19 270 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-224ENST00000507215 MCATQ8IVS2 390 aaKnown RBP8.04□□□□□ -1.12
NR1I3-224ENST00000507215 MIGA1Q8NAN2 632 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 PPM1EQ8WY54 764 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 NKD1Q969G9 470 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 TEX13BQ9BXU2 312 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 UPF3AQ9H1J1 476 aaKnown RBP8.04□□□□□ -1.12
NR1I3-224ENST00000507215 ABHD16BQ9H3Z7 469 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 KANSL2Q9H9L4 492 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 FBXO40Q9UH90 709 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 ADAM30Q9UKF2 790 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 PCDHA11Q9Y5I1 949 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 TRANK1O15050 2925 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 CHD7Q9P2D1 2997 aa8.04□□□□□ -1.12
NR1I3-224ENST00000507215 MUC6Q6W4X9 2439 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 NAV1Q8NEY1 1877 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 A0A1W2PRG0 241 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 VWA5AO00534 786 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 ATP2A1O14983 1001 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 ZEB2O60315 1214 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 ASGR1P07306 291 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 C6orf222P0C671 652 aaPredicted RBP8.03□□□□□ -1.12
NR1I3-224ENST00000507215 CSF2RAP15509 400 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 PLCD1P51178 756 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 GJA9P57773 515 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 DYNLL1P63167 89 aaKnown RBP8.03□□□□□ -1.12
NR1I3-224ENST00000507215 PDE4BQ07343 736 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 ZNF365Q70YC5 407 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 ERC1Q8IUD2 1116 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 FAM126BQ8IXS8 530 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 TRMT2AQ8IZ69 625 aaKnown RBP8.03□□□□□ -1.12
NR1I3-224ENST00000507215 SSH3Q8TE77 659 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 ATG4CQ96DT6 458 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms