RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 CNNM3Q8NE01 707 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 DDX12PQ92771 950 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 NLRP4Q96MN2 994 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 REEP2Q9BRK0 252 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 WNT8AQ9H1J5 351 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 HIPK3Q9H422 1215 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 TBC1D7Q9P0N9 293 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 STK17AQ9UEE5 414 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 TBX21Q9UL17 535 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 CDY2AQ9Y6F7 541 aa9.8□□□□□ -0.84
SCAMP1-202ENST00000506858 A0A087WZ62 844 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 SMIM35A0A1B0GVV1 85 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 TLR3O15455 904 aaKnown RBP9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 DGAT1O75907 488 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 IDEP14735 1019 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 RFC5P40937 340 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 PEX3P56589 373 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 FAM160A1Q05DH4 1040 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 LAMTOR4Q0VGL1 99 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 PNOCQ13519 176 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 GPNMBQ14956 572 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 TCTN1Q2MV58 587 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 C1orf53Q5VUE5 145 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 KRBA2Q6ZNG9 492 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 CEP57L1Q8IYX8 460 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 RETREG2Q8NC44 543 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 TMEM40Q8WWA1 233 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 DNAJC19Q96DA6 116 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 TOX2Q96NM4 488 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 OSMRQ99650 979 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 FDXACB1Q9BRP7 624 aaPredicted RBP9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 FGFBP2Q9BYJ0 223 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 MINDY3Q9H8M7 445 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 KBTBD4Q9NVX7 518 aa9.79□□□□□ -0.84
SCAMP1-202ENST00000506858 SLC26A4O43511 780 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 GPR32O75388 356 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 ACRP10323 421 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 GPC3P51654 580 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 MRPS6P82932 125 aaKnown RBP9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 MDM2Q00987 491 aaPredicted RBP9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 CAPSQ13938 189 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 IER5Q5VY09 327 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 ISM2Q6H9L7 571 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 DEFB128Q7Z7B8 93 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 RNF149Q8NC42 400 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 GLIS3Q8NEA6 775 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 NLRP7Q8WX94 980 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 PSPC1Q8WXF1 523 aaKnown RBP9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 VWCEQ96DN2 955 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 SCLT1Q96NL6 688 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 MAP7D2Q96T17 732 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 IKZF4Q9H2S9 585 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 ADAMTS10Q9H324 1103 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 AGO3Q9H9G7 860 aaKnown RBP9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 COL4A3BPQ9Y5P4 624 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 TET1Q8NFU7 2136 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 MROH7Q68CQ1 1323 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 ADGRA3Q8IWK6 1321 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 LRRIQ4A6NIV6 560 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 CCDC169A6NNP5 214 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 SLC16A4O15374 487 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 NBNO60934 754 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 IQCF3P0C7M6 154 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 GHRP10912 638 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 RAG1P15918 1043 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 CAPN2P17655 700 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 IBSPP21815 317 aaPredicted RBP9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 GUCY2CP25092 1073 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 TMOD1P28289 359 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 NMT1P30419 496 aaKnown RBP9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 DNM2P50570 870 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 EPHB4P54760 987 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 ASIC1P78348 528 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 MGAT3Q09327 533 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 TAF2Q6P1X5 1199 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 LRRC8DQ7L1W4 858 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 SFR1Q86XK3 245 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 MYCT1Q8N699 235 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 MCPH1Q8NEM0 835 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 BADQ92934 168 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 HTATIP2Q9BUP3 242 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 CELF4Q9BZC1 486 aaKnown RBP9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 TRIM9Q9C026 710 aa9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 NOC2LQ9Y3T9 749 aaKnown RBP9.78□□□□□ -0.84
SCAMP1-202ENST00000506858 GOLGA6L22H0YM25 854 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 KIAA0355O15063 1070 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 KINO60870 393 aaKnown RBP9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 FAM13AO94988 1023 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 TIMP1P01033 207 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 EDN1P05305 212 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 CSF2RAP15509 400 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 SELPP16109 830 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 NPTX2P47972 431 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 LPIN1Q14693 890 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 CDR2LQ86X02 465 aaPredicted RBP9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 C7orf25Q9BPX7 421 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 TNMDQ9H2S6 317 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 IFT122Q9HBG6 1241 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 PANK4Q9NVE7 773 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 TRPV2Q9Y5S1 764 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms