RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 MARCH6O60337 910 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 NEMFO60524 1076 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 CSDE1O75534 798 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 CHRM1P11229 460 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 FGFR1P11362 822 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 ZSCAN20P17040 1043 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 ATF7P17544 494 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 FGFR4P22455 802 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 DNAJB1P25685 340 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 YWHABP31946 246 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 RFC5P40937 340 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 GUCY1B3Q02153 619 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 CYP4A11Q02928 519 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 CTTNQ14247 550 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 CALCRLQ16602 461 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 CTC1Q2NKJ3 1217 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 LEXMQ3ZCV2 418 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 ECHDC2Q86YB7 292 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 RHPN2Q8IUC4 686 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 EXOC8Q8IYI6 725 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 KLHL23Q8NBE8 558 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 IL27Q8NEV9 243 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 SLC7A3Q8WY07 619 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 PABPC5Q96DU9 382 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 FAM212AQ96EL1 285 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 C8orf76Q96K31 380 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 CEP170P1Q96L14 293 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 SCLT1Q96NL6 688 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 CASD1Q96PB1 797 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 EIF2AK1Q9BQI3 630 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 TMEM117Q9H0C3 514 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 TMEM60Q9H2L4 133 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 FOXP1Q9H334 677 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 CWH43Q9H720 699 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 TTC12Q9H892 705 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 ATP6V0A4Q9HBG4 840 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 IFT122Q9HBG6 1241 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 ALG13Q9NP73 1137 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 XPNPEP1Q9NQW7 623 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 CHST12Q9NRB3 414 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 HCSTQ9UBK5 93 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 PLXNA4Q9HCM2 1894 aa10.15□□□□□ -0.79
PDLIM5-209ENST00000506632 ZBTB39O15060 712 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 HOXA2O43364 376 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 GAS2O43903 313 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 IBSPP21815 317 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 SFPQP23246 707 aaKnown RBP eCLIP10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 POLGP54098 1239 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 HYAL1Q12794 435 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 ORC2Q13416 577 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 EMC2Q15006 297 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 RABEP1Q15276 862 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 SAFBQ15424 915 aaKnown RBP eCLIP10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 CLLU1OSQ5K130 101 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 LRRC55Q6ZSA7 311 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 OTUD6AQ7L8S5 288 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 KSR1Q8IVT5 923 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 COLGALT1Q8NBJ5 622 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 PSPC1Q8WXF1 523 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 NECAB3Q96P71 396 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 INO80BQ9C086 356 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 ANKEF1Q9NU02 776 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 TYW1Q9NV66 732 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 DACT1Q9NYF0 836 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 COL4A3BPQ9Y5P4 624 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 XIRP2A4UGR9 3374 aa10.14□□□□□ -0.79
PDLIM5-209ENST00000506632 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 POTEMA6NI47 508 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 ASAP2O43150 1006 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 NCK2O43639 380 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 EOMESO95936 686 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 SPATA31C1P0DKV0 1188 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 KCNA5P22460 613 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 MCM7P33993 719 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 IRS1P35568 1242 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 LTBRP36941 435 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 TXKP42681 527 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 UBE3AQ05086 875 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 LAMTOR4Q0VGL1 99 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 CSPP1Q1MSJ5 1256 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 XKR9Q5GH70 373 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 SRGAP1Q7Z6B7 1085 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 FERMT3Q86UX7 667 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 NOSTRINQ8IVI9 506 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 TPH2Q8IWU9 490 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 POF1BQ8WVV4 589 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 PRPF31Q8WWY3 499 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 TMEM143Q96AN5 459 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 NLRP4Q96MN2 994 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 MINDY3Q9H8M7 445 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 AAASQ9NRG9 546 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 PCDHB12Q9Y5F1 795 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 MUC3AQ02505 3323 aa10.13□□□□□ -0.79
PDLIM5-209ENST00000506632 GRXCR2A6NFK2 248 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 ZNF623O75123 536 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 DGAT1O75907 488 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 FGF18O76093 207 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 CD2BP2O95400 341 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 XRCC6P12956 609 aaKnown RBP eCLIP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms