RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CYP11B2P19099 503 aa20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 GLRA2P23416 452 aa20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 HTRA4P83105 476 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 CAPSQ13938 189 aa20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 ODR4Q5SWX8 454 aa20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 USP49Q70CQ1 688 aa20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 CRIPAKQ8N1N5 446 aa20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 RNF149Q8NC42 400 aa20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 LINC00301Q8NCQ3 95 aa20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 MCPH1Q8NEM0 835 aa20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 CLIC6Q96NY7 704 aa20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 ADAM2Q99965 735 aa20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 ZBED2Q9BTP6 218 aa20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 SEMA6BQ9H3T3 888 aa20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 TFIP11Q9UBB9 837 aaKnown RBP20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 SRPRBQ9Y5M8 271 aaKnown RBP20.27■□□□□ 0.84
PDLIM7-216ENST00000506537 ASAP2O43150 1006 aa20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 MXD4Q14582 209 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 SPECC1Q5M775 1068 aa20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 SPRED2Q7Z698 418 aa20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 BSNDQ8WZ55 320 aa20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 ZNF396Q96N95 335 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 RAD9AQ99638 391 aa20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 RUSC1Q9BVN2 902 aa20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 ZNF576Q9H609 170 aa20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 RC3H2Q9HBD1 1191 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 RGS18Q9NS28 235 aa20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 MTMR10Q9NXD2 777 aa20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 DNM3Q9UQ16 869 aa20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 TRANK1O15050 2925 aa20.26■□□□□ 0.83
PDLIM7-216ENST00000506537 DENND3A2RUS2 1198 aa20.25■□□□□ 0.83
PDLIM7-216ENST00000506537 C9IYK1 514 aa20.25■□□□□ 0.83
PDLIM7-216ENST00000506537 SLC26A4O43511 780 aa20.25■□□□□ 0.83
PDLIM7-216ENST00000506537 UBA7P41226 1012 aa20.25■□□□□ 0.83
PDLIM7-216ENST00000506537 KARSQ15046 597 aaKnown RBP20.25■□□□□ 0.83
PDLIM7-216ENST00000506537 FAM102BQ5T8I3 360 aa20.25■□□□□ 0.83
PDLIM7-216ENST00000506537 PPP2R2DQ66LE6 453 aa20.25■□□□□ 0.83
PDLIM7-216ENST00000506537 EPSTI1Q96J88 318 aa20.25■□□□□ 0.83
PDLIM7-216ENST00000506537 GUCD1Q96NT3 240 aa20.25■□□□□ 0.83
PDLIM7-216ENST00000506537 NT5C3AQ9H0P0 336 aa20.25■□□□□ 0.83
PDLIM7-216ENST00000506537 POLD4Q9HCU8 107 aa20.25■□□□□ 0.83
PDLIM7-216ENST00000506537 PLCG1P19174 1290 aa20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 SFPQP23246 707 aaKnown RBP eCLIP20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 SARSP49591 514 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 PTENP60484 403 aa20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 TAP1Q03518 808 aa20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 STK38Q15208 465 aa20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 FAM43BQ6ZT52 329 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 SRGAP1Q7Z6B7 1085 aa20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 IFNLR1Q8IU57 520 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 SP7Q8TDD2 431 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 SYMPKQ92797 1274 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 CDK5RAP3Q96JB5 506 aa20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 CCSER1Q9C0I3 900 aa20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 SLC28A3Q9HAS3 691 aa20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 DAXXQ9UER7 740 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-216ENST00000506537 YEATS4O95619 227 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 PHKA2P46019 1235 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 SLC12A3P55017 1021 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 DNM1Q05193 864 aaKnown RBP20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 POU5F1BQ06416 359 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 GRIN2CQ14957 1233 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 RINT1Q6NUQ1 792 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 C1orf186Q6ZWK4 172 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 CATSPER4Q7RTX7 472 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 NPAS4Q8IUM7 802 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 KCTD17Q8N5Z5 321 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 KRI1Q8N9T8 703 aaKnown RBP20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 CHAMP1Q96JM3 812 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 INO80BQ9C086 356 aaPredicted RBP20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 C1orf112Q9NSG2 853 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 BLOC1S4Q9NUP1 217 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 INSL6Q9Y581 213 aa20.23■□□□□ 0.83
PDLIM7-216ENST00000506537 LINC01553A4QN01 128 aa20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 SPTLC2O15270 562 aa20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 PLA2G4BP0C869 781 aa20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 IBSPP21815 317 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 MBTD1Q05BQ5 628 aa20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 MAPK7Q13164 816 aa20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 TFDP1Q14186 410 aa20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 SLC24A5Q71RS6 500 aa20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 DAW1Q8N136 415 aa20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 ZNF689Q96CS4 500 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 CALML4Q96GE6 196 aa20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 YME1L1Q96TA2 773 aa20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 NFKBIZQ9BYH8 718 aa20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 AGPAT5Q9NUQ2 364 aa20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 PIN4Q9Y237 131 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-216ENST00000506537 LRRIQ4A6NIV6 560 aa20.21■□□□□ 0.83
PDLIM7-216ENST00000506537 PPP6R2O75170 966 aa20.21■□□□□ 0.83
PDLIM7-216ENST00000506537 DGKIO75912 1065 aa20.21■□□□□ 0.83
PDLIM7-216ENST00000506537 SSBP05455 408 aaKnown RBP eCLIP20.21■□□□□ 0.83
PDLIM7-216ENST00000506537 DDIT3P35638 169 aa20.21■□□□□ 0.83
PDLIM7-216ENST00000506537 GATMP50440 423 aa20.21■□□□□ 0.83
PDLIM7-216ENST00000506537 FAM189BP81408 668 aa20.21■□□□□ 0.83
PDLIM7-216ENST00000506537 AMHR2Q16671 573 aa20.21■□□□□ 0.83
PDLIM7-216ENST00000506537 CDCA2Q69YH5 1023 aaPredicted RBP20.21■□□□□ 0.83
PDLIM7-216ENST00000506537 SYT2Q8N9I0 419 aaPredicted RBP20.21■□□□□ 0.83
PDLIM7-216ENST00000506537 COL4A4P53420 1690 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-216ENST00000506537 EPOPA6NHQ4 379 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms