RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 BMP8AQ7Z5Y6 402 aa7.77□□□□□ -1.17
HERC4-213ENST00000506515 C14orf80Q86SX3 495 aa7.77□□□□□ -1.17
HERC4-213ENST00000506515 RSAD2Q8WXG1 361 aa7.77□□□□□ -1.17
HERC4-213ENST00000506515 ZCCHC14Q8WYQ9 949 aaKnown RBP7.77□□□□□ -1.17
HERC4-213ENST00000506515 DYDC2Q96IM9 177 aa7.77□□□□□ -1.17
HERC4-213ENST00000506515 ACE2Q9BYF1 805 aaPredicted RBP7.77□□□□□ -1.17
HERC4-213ENST00000506515 Q9UFV3 132 aa7.77□□□□□ -1.17
HERC4-213ENST00000506515 EVLQ9UI08 416 aaPredicted RBP7.77□□□□□ -1.17
HERC4-213ENST00000506515 SYNPO2Q9UMS6 1093 aa7.77□□□□□ -1.17
HERC4-213ENST00000506515 PDS5BQ9NTI5 1447 aa7.77□□□□□ -1.17
HERC4-213ENST00000506515 SMARCA2P51531 1590 aa7.76□□□□□ -1.17
HERC4-213ENST00000506515 DDX3XO00571 662 aaKnown RBP eCLIP7.76□□□□□ -1.17
HERC4-213ENST00000506515 PRPF3O43395 683 aaKnown RBP7.76□□□□□ -1.17
HERC4-213ENST00000506515 CUTAO60888 179 aa7.76□□□□□ -1.17
HERC4-213ENST00000506515 NDUFS2O75306 463 aa7.76□□□□□ -1.17
HERC4-213ENST00000506515 ZRANB2O95218 330 aaKnown RBP eCLIP7.76□□□□□ -1.171e-6■■■■□ 23.3
HERC4-213ENST00000506515 CHGBP05060 677 aa7.76□□□□□ -1.17
HERC4-213ENST00000506515 MED14OSP0DP75 135 aa7.76□□□□□ -1.17
HERC4-213ENST00000506515 XPAP23025 273 aaPredicted RBP7.76□□□□□ -1.17
HERC4-213ENST00000506515 KCNQ1P51787 676 aa7.76□□□□□ -1.17
HERC4-213ENST00000506515 PRR31Q5SQ13 230 aa7.76□□□□□ -1.17
HERC4-213ENST00000506515 FAM102BQ5T8I3 360 aa7.76□□□□□ -1.17
HERC4-213ENST00000506515 MBNL2Q5VZF2 373 aaKnown RBP7.76□□□□□ -1.17
HERC4-213ENST00000506515 SSH1Q8WYL5 1049 aa7.76□□□□□ -1.17
HERC4-213ENST00000506515 L2HGDHQ9H9P8 463 aa7.76□□□□□ -1.17
HERC4-213ENST00000506515 SAE1Q9UBE0 346 aaPredicted RBP7.76□□□□□ -1.17
HERC4-213ENST00000506515 DNAI1Q9UI46 699 aa7.76□□□□□ -1.17
HERC4-213ENST00000506515 KCTD3Q9Y597 815 aa7.76□□□□□ -1.17
HERC4-213ENST00000506515 MAFO75444 373 aaPredicted RBP7.75□□□□□ -1.17
HERC4-213ENST00000506515 C1QTNF9P0C862 333 aa7.75□□□□□ -1.17
HERC4-213ENST00000506515 ATF3P18847 181 aa7.75□□□□□ -1.17
HERC4-213ENST00000506515 RPL13P26373 211 aaKnown RBP7.75□□□□□ -1.17
HERC4-213ENST00000506515 STAT5BP51692 787 aa7.75□□□□□ -1.17
HERC4-213ENST00000506515 MLC1Q15049 377 aa7.75□□□□□ -1.17
HERC4-213ENST00000506515 CCDC181Q5TID7 509 aa7.75□□□□□ -1.17
HERC4-213ENST00000506515 TMEM200BQ69YZ2 307 aa7.75□□□□□ -1.17
HERC4-213ENST00000506515 ZNF526Q8TF50 670 aaPredicted RBP7.75□□□□□ -1.17
HERC4-213ENST00000506515 CCDC136Q96JN2 1154 aa7.75□□□□□ -1.17
HERC4-213ENST00000506515 POLR3BQ9NW08 1133 aaPredicted RBP7.75□□□□□ -1.17
HERC4-213ENST00000506515 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.75□□□□□ -1.17
HERC4-213ENST00000506515 TUBD1Q9UJT1 453 aa7.75□□□□□ -1.17
HERC4-213ENST00000506515 FBXO10Q9UK96 956 aa7.75□□□□□ -1.17
HERC4-213ENST00000506515 SMG5Q9UPR3 1016 aaKnown RBP7.75□□□□□ -1.17
HERC4-213ENST00000506515 KRT1P04264 644 aa7.74□□□□□ -1.17
HERC4-213ENST00000506515 ZNF28P17035 718 aa7.74□□□□□ -1.17
HERC4-213ENST00000506515 GPR15P49685 360 aa7.74□□□□□ -1.17
HERC4-213ENST00000506515 KIF23Q02241 960 aaPredicted RBP7.74□□□□□ -1.17
HERC4-213ENST00000506515 SAPCD2Q86UD0 394 aa7.74□□□□□ -1.17
HERC4-213ENST00000506515 TCEAL8Q8IYN2 117 aa7.74□□□□□ -1.17
HERC4-213ENST00000506515 BCL6BQ8N143 479 aaPredicted RBP7.74□□□□□ -1.17
HERC4-213ENST00000506515 MIER2Q8N344 545 aa7.74□□□□□ -1.17
HERC4-213ENST00000506515 NUDT10Q8NFP7 164 aa7.74□□□□□ -1.17
HERC4-213ENST00000506515 NUDT11Q96G61 164 aa7.74□□□□□ -1.17
HERC4-213ENST00000506515 LRGUKQ96M69 825 aa7.74□□□□□ -1.17
HERC4-213ENST00000506515 SLC38A3Q99624 504 aa7.74□□□□□ -1.17
HERC4-213ENST00000506515 ZBTB21Q9ULJ3 1066 aa7.74□□□□□ -1.17
HERC4-213ENST00000506515 PNMA8BQ9ULN7 279 aaPredicted RBP7.74□□□□□ -1.17
HERC4-213ENST00000506515 A0A0A6YYK5 440 aaPredicted RBP7.73□□□□□ -1.17
HERC4-213ENST00000506515 NRP2O60462 931 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 KLHL18O94889 574 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 POLD1P28340 1107 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 CYP2C19P33261 490 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 NRG3P56975 720 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 DLX2Q07687 328 aaPredicted RBP7.73□□□□□ -1.17
HERC4-213ENST00000506515 MGAT5Q09328 741 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 VWA3BQ502W6 1294 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 ZNF648Q5T619 568 aaPredicted RBP7.73□□□□□ -1.17
HERC4-213ENST00000506515 NXNQ6DKJ4 435 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 LMBR1LQ6UX01 489 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 ADGRG2Q8IZP9 1017 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 MAGEB6Q8N7X4 407 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.73□□□□□ -1.17
HERC4-213ENST00000506515 FATE1Q969F0 183 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 C8orf48Q96LL4 319 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 PPP1R16BQ96T49 567 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 FDXACB1Q9BRP7 624 aaPredicted RBP7.73□□□□□ -1.17
HERC4-213ENST00000506515 SOX7Q9BT81 388 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 HAPLN2Q9GZV7 340 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 CSRNP2Q9H175 543 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 NTMQ9P121 344 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 RNF114Q9Y508 228 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 ATAD2BQ9ULI0 1458 aa7.73□□□□□ -1.17
HERC4-213ENST00000506515 A0A1B0GTL3 188 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 RFXAPO00287 272 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 HMGCRP04035 888 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 VCAM1P19320 739 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 TOP3AQ13472 1001 aaPredicted RBP7.72□□□□□ -1.17
HERC4-213ENST00000506515 ADRM1Q16186 407 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 ANO4Q32M45 955 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 UAP1L1Q3KQV9 507 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 ZNF385BQ569K4 471 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 CCDC178Q5BJE1 867 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 CXorf57Q6NSI4 855 aaKnown RBP7.72□□□□□ -1.17
HERC4-213ENST00000506515 GLB1L2Q8IW92 636 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 IFNL2Q8IZJ0 200 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 THEMISQ8N1K5 641 aaPredicted RBP7.72□□□□□ -1.17
HERC4-213ENST00000506515 TTC8Q8TAM2 541 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 WDR92Q96MX6 357 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 SPATA25Q9BR10 227 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 DNM3Q9UQ16 869 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms