RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 SLMAPQ14BN4 828 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 RASA2Q15283 850 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 KIAA1614Q5VZ46 1190 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ZNF746Q6NUN9 644 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 DNAJB7Q7Z6W7 309 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CEP95Q96GE4 821 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 NEK1Q96PY6 1258 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 FOXP3Q9BZS1 431 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 METTL14Q9HCE5 456 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 TUBA8Q9NY65 449 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 PCDH10Q9P2E7 1040 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 PCSK1NQ9UHG2 260 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 DIS3Q9Y2L1 958 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 KLF2Q9Y5W3 355 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 PHLPP2Q6ZVD8 1323 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 HMGB1P1B2RPK0 211 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 PRODHO43272 600 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 SERPINB7O75635 380 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 JMJD7P0C870 316 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 PF4V1P10720 104 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GNAT1P11488 350 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 EPB42P16452 691 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ENDOUP21128 410 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 OAS2P29728 719 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GCKP35557 465 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CCNFP41002 786 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ACTN3Q08043 901 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 NFX1Q12986 1120 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ATP13A4Q4VNC1 1196 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 AGAP9Q5VTM2 703 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 SULT6B1Q6IMI4 303 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ZSCAN25Q6NSZ9 544 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ABTB2Q8N961 1025 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ITPKCQ96DU7 683 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GIMAP5Q96F15 307 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ZHX3Q9H4I2 956 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 RABEP2Q9H5N1 569 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 TBCCD1Q9NVR7 557 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 TRHDEQ9UKU6 1024 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ZNF652Q9Y2D9 606 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 HTR3EA5X5Y0 456 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 BCAR3O75815 825 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 SLU7O95391 586 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GSPT1P15170 499 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 VAMP1P23763 118 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 MAN1A1P33908 653 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 HTTP42858 3142 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 BPIFB4P59827 614 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 SLC30A10Q6XR72 485 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 IQCA1Q86XH1 822 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 DDX42Q86XP3 938 aaKnown RBP eCLIP2.5□□□□□ -2.019e-8■■■■■ 81.4
NEDD4-205ENST00000506154 TMEM139Q8IV31 216 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CNTD1Q8N815 330 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 STK35Q8TDR2 534 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 FBF1Q8TES7 1133 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 POF1BQ8WVV4 589 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CENPTQ96BT3 561 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 SAAL1Q96ER3 474 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GMLQ99445 158 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 MKRN2Q9H000 416 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 FAM107BQ9H098 131 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GPRC5CQ9NQ84 441 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ATXN10Q9UBB4 475 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 MAGED2Q9UNF1 606 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 RABL2BQ9UNT1 228 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 MTMR6Q9Y217 621 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 SNX9Q9Y5X1 595 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 PSDA5PKW4 1024 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-205ENST00000506154 TMEM247A6NEH6 219 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 C19orf81C9J6K1 198 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 PIP5K1CO60331 668 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 INMTO95050 263 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 CCNCP24863 283 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 SCNN1BP51168 640 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 SESN3P58005 492 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 NLRP12P59046 1061 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 CENPCQ03188 943 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 PTPN12Q05209 780 aaKnown RBP2.49□□□□□ -2.01
NEDD4-205ENST00000506154 MAPRE1Q15691 268 aaKnown RBP2.49□□□□□ -2.01
NEDD4-205ENST00000506154 DDR2Q16832 855 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 IER5LQ5T953 404 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 DENND2CQ68D51 928 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 FCRLBQ6BAA4 426 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 TTBK2Q6IQ55 1244 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 C12orf40Q86WS4 652 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 CCNJLQ8IV13 435 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 IFNL2Q8IZJ0 200 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 ACMSDQ8TDX5 336 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 RTF1Q92541 710 aaKnown RBP2.49□□□□□ -2.01
NEDD4-205ENST00000506154 N4BP2L2Q92802 583 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-205ENST00000506154 RPRD1AQ96P16 312 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-205ENST00000506154 IWS1Q96ST2 819 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 SLC6A16Q9GZN6 736 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 METTL5Q9NRN9 209 aaKnown RBP2.49□□□□□ -2.01
NEDD4-205ENST00000506154 SAMSN1Q9NSI8 373 aaKnown RBP2.49□□□□□ -2.01
NEDD4-205ENST00000506154 EVLQ9UI08 416 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-205ENST00000506154 AFF2P51816 1311 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 CCDC151A5D8V7 595 aa2.49□□□□□ -2.01
NEDD4-205ENST00000506154 USP27XA6NNY8 438 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms