RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 SMAP1Q8IYB5 467 aaPredicted RBP9.31□□□□□ -0.92
SNF8-204ENST00000506104 VPS52Q8N1B4 723 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 GJA10Q969M2 543 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 ASIC4Q96FT7 647 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 CCDC136Q96JN2 1154 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 SNX27Q96L92 541 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 NECTIN4Q96NY8 510 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 FAM193BQ96PV7 902 aaPredicted RBP9.31□□□□□ -0.92
SNF8-204ENST00000506104 TEKT3Q9BXF9 490 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 SLC26A6Q9BXS9 759 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 MRPL9Q9BYD2 267 aaKnown RBP9.31□□□□□ -0.92
SNF8-204ENST00000506104 GCOM2Q9BZD3 368 aaPredicted RBP9.31□□□□□ -0.92
SNF8-204ENST00000506104 DISC1Q9NRI5 854 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 RNF19AQ9NV58 838 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 DACT1Q9NYF0 836 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 FBXL21Q9UKT6 434 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 SORCS3Q9UPU3 1222 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 MAFBQ9Y5Q3 323 aaPredicted RBP9.31□□□□□ -0.92
SNF8-204ENST00000506104 PLXNA3P51805 1871 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 IGLV3-22A0A075B6J6 115 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 TMEM150BA6NC51 233 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 DDX11L8A8MPP1 907 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 EPCAMP16422 314 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 GNA11P29992 359 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 DNM2P50570 870 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 NLRP5P59047 1200 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 FAM189BP81408 668 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 ITIH3Q06033 890 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 UGCGQ16739 394 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 LRCH2Q5VUJ6 765 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 Q6ZUG5 572 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 CATSPER4Q7RTX7 472 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 CABP7Q86V35 215 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 RHPN2Q8IUC4 686 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 SLC39A11Q8N1S5 342 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 MRPL43Q8N983 215 aaKnown RBP9.3□□□□□ -0.92
SNF8-204ENST00000506104 KCNG4Q8TDN1 519 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 BRF1Q92994 677 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 PHKBQ93100 1093 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 NLRP4Q96MN2 994 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 JAKMIP1Q96N16 626 aaKnown RBP9.3□□□□□ -0.92
SNF8-204ENST00000506104 SLKQ9H2G2 1235 aaPredicted RBP9.3□□□□□ -0.92
SNF8-204ENST00000506104 ADAM7Q9H2U9 754 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 BMP2KQ9NSY1 1161 aaPredicted RBP9.3□□□□□ -0.92
SNF8-204ENST00000506104 PIN4Q9Y237 131 aaKnown RBP9.3□□□□□ -0.92
SNF8-204ENST00000506104 C2orf16Q68DN1 1984 aa9.3□□□□□ -0.92
SNF8-204ENST00000506104 A0A087WZ62 844 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 CCDC196A0A1B0GTZ2 297 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 C2CD2LO14523 706 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 GALR2O43603 387 aaPredicted RBP9.29□□□□□ -0.92
SNF8-204ENST00000506104 CYP3A4P08684 503 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 DARSP14868 501 aaKnown RBP9.29□□□□□ -0.92
SNF8-204ENST00000506104 SFPQP23246 707 aaKnown RBP eCLIP9.29□□□□□ -0.92
SNF8-204ENST00000506104 KLRC2P26717 231 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 CLK2P49760 499 aaKnown RBP9.29□□□□□ -0.92
SNF8-204ENST00000506104 GPC3P51654 580 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 CCT2P78371 535 aaKnown RBP9.29□□□□□ -0.92
SNF8-204ENST00000506104 EXOSC10Q01780 885 aaKnown RBP9.29□□□□□ -0.92
SNF8-204ENST00000506104 KRT32Q14532 448 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 TMEM184AQ6ZMB5 413 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 UBALD2Q8IYN6 164 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 RASEFQ8IZ41 740 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 TMEM105Q8N8V8 129 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 BICD2Q8TD16 824 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 FDXACB1Q9BRP7 624 aaPredicted RBP9.29□□□□□ -0.92
SNF8-204ENST00000506104 ADAMTS10Q9H324 1103 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 UNC45AQ9H3U1 944 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 VPS54Q9P1Q0 977 aa9.29□□□□□ -0.92
SNF8-204ENST00000506104 DAXXQ9UER7 740 aaPredicted RBP9.29□□□□□ -0.92
SNF8-204ENST00000506104 A0A0U1RQF3 1178 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 MSH4O15457 936 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 ZNF862O60290 1169 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 MARCH6O60337 910 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 EOMESO95936 686 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 GBP2P32456 591 aaPredicted RBP9.28□□□□□ -0.92
SNF8-204ENST00000506104 JAK3P52333 1124 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 FUT2Q10981 343 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 DRP2Q13474 957 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 MCTP2Q6DN12 878 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 ASTLQ6HA08 431 aaPredicted RBP9.28□□□□□ -0.92
SNF8-204ENST00000506104 BLOC1S2Q6QNY1 142 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 GLB1LQ6UWU2 654 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 ASCL5Q7RTU5 278 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 FRMD5Q7Z6J6 570 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 KSR1Q8IVT5 923 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 CCDC148Q8NFR7 591 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 URGCPQ8TCY9 931 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 ACSF2Q96CM8 615 aaPredicted RBP9.28□□□□□ -0.92
SNF8-204ENST00000506104 CYP26B1Q9NR63 512 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 FAM217BQ9NTX9 383 aaPredicted RBP9.28□□□□□ -0.92
SNF8-204ENST00000506104 DZANK1Q9NVP4 752 aa9.28□□□□□ -0.92
SNF8-204ENST00000506104 SUCLA2Q9P2R7 463 aaPredicted RBP9.28□□□□□ -0.92
SNF8-204ENST00000506104 TDRD15B5MCY1 1934 aaKnown RBP9.28□□□□□ -0.92
SNF8-204ENST00000506104 MEIS3P2A8K0S8 358 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 HMGB1P09429 215 aaKnown RBP9.27□□□□□ -0.93
SNF8-204ENST00000506104 SRGAP2CP0DJJ0 459 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 SKIP12755 728 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 SFNP31947 248 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 PHKA2P46019 1235 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 AK2P54819 239 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms