RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 RALBP1Q15311 655 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 TMEM266Q2M3C6 531 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 PLK5Q496M5 336 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 CLLU1OSQ5K130 101 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 TTBK2Q6IQ55 1244 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 RCSD1Q6JBY9 416 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 BTNL9Q6UXG8 535 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 Q6ZS52 159 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 CEP68Q76N32 757 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 GET4Q7L5D6 327 aaPredicted RBP3.96□□□□□ -1.78
TCOF1-208ENST00000506063 CACNA2D4Q7Z3S7 1137 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 DDX53Q86TM3 631 aaKnown RBP3.96□□□□□ -1.78
TCOF1-208ENST00000506063 PPFIBP1Q86W92 1011 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 LRRC43Q8N309 656 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 SPEM1Q8N4L4 309 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.96□□□□□ -1.78
TCOF1-208ENST00000506063 PIP4K2CQ8TBX8 421 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 SYTL5Q8TDW5 730 aaPredicted RBP3.96□□□□□ -1.78
TCOF1-208ENST00000506063 TMEM40Q8WWA1 233 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 ADAMTS14Q8WXS8 1223 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 SMG7Q92540 1137 aaKnown RBP3.96□□□□□ -1.78
TCOF1-208ENST00000506063 MEIS3Q99687 375 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 PLA2G2FQ9BZM2 168 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 TMEM117Q9H0C3 514 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 DUSP15Q9H1R2 295 aaPredicted RBP3.96□□□□□ -1.78
TCOF1-208ENST00000506063 LMAN1LQ9HAT1 526 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 TMEM9BQ9NQ34 198 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 MAN1C1Q9NR34 630 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 TMEM161AQ9NX61 479 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 DNMT3LQ9UJW3 386 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 LRFN2Q9ULH4 789 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 NDRG2Q9UN36 371 aaKnown RBP3.96□□□□□ -1.78
TCOF1-208ENST00000506063 ZMYM2Q9UBW7 1377 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 OTOGQ6ZRI0 2925 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 MED13Q9UHV7 2174 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 PTPRCP08575 1304 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 KDM3AQ9Y4C1 1321 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 MED13LQ71F56 2210 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 PNMA6EA0A0J9YXQ4 647 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 CLEC18AA5D8T8 446 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 FAM205CA6NFA0 338 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 MEFVO15553 781 aaPredicted RBP3.95□□□□□ -1.78
TCOF1-208ENST00000506063 SRGAP3O43295 1099 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 RPP40O75818 363 aaKnown RBP3.95□□□□□ -1.78
TCOF1-208ENST00000506063 EIF3JO75822 258 aaKnown RBP3.95□□□□□ -1.78
TCOF1-208ENST00000506063 MBD4O95243 580 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 GNAT1P11488 350 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 SLC16A2P36021 539 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 SLC1A4P43007 532 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 ABCG1P45844 678 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 NOVP48745 357 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 ALDH7A1P49419 539 aaKnown RBP3.95□□□□□ -1.78
TCOF1-208ENST00000506063 METAP2P50579 478 aaKnown RBP eCLIP3.95□□□□□ -1.78
TCOF1-208ENST00000506063 RARSP54136 660 aaKnown RBP3.95□□□□□ -1.78
TCOF1-208ENST00000506063 BCAR1P56945 870 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 IRX4P78413 519 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 PAK2Q13177 524 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 SEMA3FQ13275 785 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 G3BP1Q13283 466 aaKnown RBP eCLIP3.95□□□□□ -1.78
TCOF1-208ENST00000506063 CAMK2BQ13554 666 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 GIT2Q14161 759 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 PPP2R5DQ14738 602 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 STXBP2Q15833 593 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 ZNF423Q2M1K9 1284 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 CCDC158Q5M9N0 1113 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 SLC9C2Q5TAH2 1124 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 CLEC18BQ6UXF7 455 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 SLC24A5Q71RS6 500 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 ZNF280BQ86YH2 543 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 FMNL3Q8IVF7 1028 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 CLEC18CQ8NCF0 446 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 RGS22Q8NE09 1264 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 IL31RAQ8NI17 732 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 SPIRE2Q8WWL2 714 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 IGSF21Q96ID5 467 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 IWS1Q96ST2 819 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 ADAM2Q99965 735 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 KXD1Q9BQD3 176 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 NT5C3AQ9H0P0 336 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 ELAC1Q9H777 363 aaKnown RBP3.95□□□□□ -1.78
TCOF1-208ENST00000506063 CDHR5Q9HBB8 845 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 GPCPD1Q9NPB8 672 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 C1orf112Q9NSG2 853 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 RBM12Q9NTZ6 932 aaKnown RBP3.95□□□□□ -1.78
TCOF1-208ENST00000506063 CDH7Q9ULB5 785 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 MRPS17Q9Y2R5 130 aaKnown RBP3.95□□□□□ -1.78
TCOF1-208ENST00000506063 TRPV2Q9Y5S1 764 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 MRVI1Q9Y6F6 885 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 ZFP37Q9Y6Q3 630 aaPredicted RBP3.95□□□□□ -1.78
TCOF1-208ENST00000506063 CELSR2Q9HCU4 2923 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 TLN1Q9Y490 2541 aaKnown RBP3.95□□□□□ -1.78
TCOF1-208ENST00000506063 SPG11Q96JI7 2443 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 WDR19Q8NEZ3 1342 aa3.95□□□□□ -1.78
TCOF1-208ENST00000506063 CCDC163A0A0D9SF12 145 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 CCDC194A0A1B0GVG4 234 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 CAPN8A6NHC0 703 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 ARNTLO00327 626 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 TERTO14746 1132 aaKnown RBP3.94□□□□□ -1.78
TCOF1-208ENST00000506063 OPLAHO14841 1288 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 PRDM1O75626 825 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms