RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 POLD4Q9HCU8 107 aa25.4■■□□□ 1.66
SPOCK1-204ENST00000505690 PADI3Q9ULW8 664 aa25.4■■□□□ 1.66
SPOCK1-204ENST00000505690 A0A1W2PQ27 194 aa25.39■■□□□ 1.66
SPOCK1-204ENST00000505690 A0A1W2PQ64 194 aa25.39■■□□□ 1.66
SPOCK1-204ENST00000505690 A0A1W2PQD8 194 aa25.39■■□□□ 1.66
SPOCK1-204ENST00000505690 HIP1RO75146 1068 aa25.39■■□□□ 1.66
SPOCK1-204ENST00000505690 E2F4Q16254 413 aa25.39■■□□□ 1.66
SPOCK1-204ENST00000505690 ARSHQ5FYA8 562 aa25.39■■□□□ 1.66
SPOCK1-204ENST00000505690 ODR4Q5SWX8 454 aa25.39■■□□□ 1.66
SPOCK1-204ENST00000505690 FAM228AQ86W67 206 aa25.39■■□□□ 1.66
SPOCK1-204ENST00000505690 DHX58Q96C10 678 aa25.39■■□□□ 1.66
SPOCK1-204ENST00000505690 MTIF3Q9H2K0 278 aaKnown RBP25.39■■□□□ 1.66
SPOCK1-204ENST00000505690 IFT122Q9HBG6 1241 aa25.39■■□□□ 1.66
SPOCK1-204ENST00000505690 ERVK-5Q9HDB9 667 aa25.39■■□□□ 1.66
SPOCK1-204ENST00000505690 GPR182O15218 404 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 POLR2DO15514 142 aaKnown RBP25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 BAIAP3O94812 1187 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 PHKA2P46019 1235 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 POU5F1BQ06416 359 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 RAD51AP2Q09MP3 1159 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 NFX1Q12986 1120 aaKnown RBP25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 MAPK7Q13164 816 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 IKBKEQ14164 716 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 TPRNQ4KMQ1 711 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 SV2BQ7L1I2 683 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 DAW1Q8N136 415 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 IQUBQ8NA54 791 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 BSNDQ8WZ55 320 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 RNPC3Q96LT9 517 aaKnown RBP25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 DRC1Q96MC2 740 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 PYM1Q9BRP8 204 aaKnown RBP25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 INO80BQ9C086 356 aaPredicted RBP25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 CUEDC2Q9H467 287 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 KCNH3Q9ULD8 1083 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 ST3GAL5Q9UNP4 418 aa25.38■■□□□ 1.65
SPOCK1-204ENST00000505690 NPHP3-ACAD11A0A0J9YXS1 232 aa25.37■■□□□ 1.65
SPOCK1-204ENST00000505690 A0A1B0GVL5 298 aa25.37■■□□□ 1.65
SPOCK1-204ENST00000505690 ABHD14A-ACY1A0A1B0GW23 586 aa25.37■■□□□ 1.65
SPOCK1-204ENST00000505690 PFKFB1P16118 471 aa25.37■■□□□ 1.65
SPOCK1-204ENST00000505690 PPP2R5AQ15172 486 aa25.37■■□□□ 1.65
SPOCK1-204ENST00000505690 CSPP1Q1MSJ5 1256 aa25.37■■□□□ 1.65
SPOCK1-204ENST00000505690 SRGAP1Q7Z6B7 1085 aa25.37■■□□□ 1.65
SPOCK1-204ENST00000505690 IFT74Q96LB3 600 aa25.37■■□□□ 1.65
SPOCK1-204ENST00000505690 A0A1W2PPC1 479 aa25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 LRRIQ4A6NIV6 560 aa25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 ZBBXA8MT70 800 aa25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 EFCAB14O75071 495 aa25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 CSDE1O75534 798 aaKnown RBP25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 KRT18P05783 430 aaKnown RBP25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 PTENP60484 403 aa25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 CACNB1Q02641 598 aaPredicted RBP25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 RASIP1Q5U651 963 aa25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 IFNLR1Q8IU57 520 aaPredicted RBP25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 FSIP1Q8NA03 581 aa25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 MRPS27Q92552 414 aaKnown RBP25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 REEP2Q9BRK0 252 aa25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 CXXC1Q9P0U4 656 aaPredicted RBP25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 ODF2LQ9ULJ1 636 aa25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 HPSEQ9Y251 543 aa25.36■■□□□ 1.65
SPOCK1-204ENST00000505690 FAM237AA0A1B0GTK4 181 aa25.35■■□□□ 1.65
SPOCK1-204ENST00000505690 GOLGA6L4A6NEF3 574 aa25.35■■□□□ 1.65
SPOCK1-204ENST00000505690 FGFR4P22455 802 aa25.35■■□□□ 1.65
SPOCK1-204ENST00000505690 SFPQP23246 707 aaKnown RBP eCLIP25.35■■□□□ 1.65
SPOCK1-204ENST00000505690 NAMPTP43490 491 aa25.35■■□□□ 1.65
SPOCK1-204ENST00000505690 GIT2Q14161 759 aa25.35■■□□□ 1.65
SPOCK1-204ENST00000505690 FTHL17Q9BXU8 183 aa25.35■■□□□ 1.65
SPOCK1-204ENST00000505690 NFKBIZQ9BYH8 718 aa25.35■■□□□ 1.65
SPOCK1-204ENST00000505690 C17orf75Q9HAS0 396 aa25.35■■□□□ 1.65
SPOCK1-204ENST00000505690 SFI1A8K8P3 1242 aa25.34■■□□□ 1.65
SPOCK1-204ENST00000505690 FAM43BQ6ZT52 329 aaPredicted RBP25.34■■□□□ 1.65
SPOCK1-204ENST00000505690 TNMDQ9H2S6 317 aa25.34■■□□□ 1.65
SPOCK1-204ENST00000505690 TMX1Q9H3N1 280 aa25.34■■□□□ 1.65
SPOCK1-204ENST00000505690 MINDY3Q9H8M7 445 aa25.34■■□□□ 1.65
SPOCK1-204ENST00000505690 MYMKA6NI61 221 aa25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 KCNJ6P48051 423 aa25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 NDUFA8P51970 172 aa25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 PEX3P56589 373 aa25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 WDR5P61964 334 aaKnown RBP25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 DMP1Q13316 513 aaPredicted RBP25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 CDCA2Q69YH5 1023 aaPredicted RBP25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 CATSPER4Q7RTX7 472 aa25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 ZBTB8OSQ8IWT0 167 aa25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 DEPTORQ8TB45 409 aa25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 DDX12PQ92771 950 aa25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 C2orf40Q9H1Z8 148 aa25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 GOLPH3LQ9H4A5 285 aa25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 MAGEF1Q9HAY2 307 aa25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 KBTBD4Q9NVX7 518 aa25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 SLC4A7Q9Y6M7 1214 aa25.33■■□□□ 1.65
SPOCK1-204ENST00000505690 INO80B-WBP1J3KQ70 363 aa25.32■■□□□ 1.64
SPOCK1-204ENST00000505690 FAM13AO94988 1023 aa25.32■■□□□ 1.64
SPOCK1-204ENST00000505690 PLS3P13797 630 aa25.32■■□□□ 1.64
SPOCK1-204ENST00000505690 SYKP43405 635 aa25.32■■□□□ 1.64
SPOCK1-204ENST00000505690 NPTX2P47972 431 aa25.32■■□□□ 1.64
SPOCK1-204ENST00000505690 MBTD1Q05BQ5 628 aa25.32■■□□□ 1.64
SPOCK1-204ENST00000505690 DYMQ7RTS9 669 aa25.32■■□□□ 1.64
SPOCK1-204ENST00000505690 STAMQ92783 540 aa25.32■■□□□ 1.64
SPOCK1-204ENST00000505690 LRRC27Q9C0I9 530 aa25.32■■□□□ 1.64
SPOCK1-204ENST00000505690 SERTAD1Q9UHV2 236 aa25.32■■□□□ 1.64
SPOCK1-204ENST00000505690 MICAL3Q7RTP6 2002 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms