RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 ARHGEF35A5YM69 484 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 E9PMD0 336 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 USO1O60763 962 aaKnown RBP9.68□□□□□ -0.86
CTSB-205ENST00000505496 CSDE1O75534 798 aaKnown RBP9.68□□□□□ -0.86
CTSB-205ENST00000505496 DGKIO75912 1065 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 F13A1P00488 732 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 LINC00271P0C7V0 271 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 SFPQP23246 707 aaKnown RBP eCLIP9.68□□□□□ -0.86
CTSB-205ENST00000505496 GLRA2P23416 452 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 HOXA11P31270 313 aaPredicted RBP9.68□□□□□ -0.86
CTSB-205ENST00000505496 GRB10Q13322 594 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 CAPSQ13938 189 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 PPP2R2DQ66LE6 453 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 CDCA2Q69YH5 1023 aaPredicted RBP9.68□□□□□ -0.86
CTSB-205ENST00000505496 ATL3Q6DD88 541 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 C1orf186Q6ZWK4 172 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 NPAS4Q8IUM7 802 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 RNF149Q8NC42 400 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 LINC00301Q8NCQ3 95 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 ZNF668Q96K58 619 aaPredicted RBP9.68□□□□□ -0.86
CTSB-205ENST00000505496 NLRP4Q96MN2 994 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 CCDC43Q96MW1 224 aaKnown RBP9.68□□□□□ -0.86
CTSB-205ENST00000505496 CDX2Q99626 313 aaPredicted RBP9.68□□□□□ -0.86
CTSB-205ENST00000505496 ADAM2Q99965 735 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 ZBED2Q9BTP6 218 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 CCSER1Q9C0I3 900 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 POLR3FQ9H1D9 316 aaPredicted RBP9.68□□□□□ -0.86
CTSB-205ENST00000505496 ELAC1Q9H777 363 aaKnown RBP9.68□□□□□ -0.86
CTSB-205ENST00000505496 BMP2KQ9NSY1 1161 aaPredicted RBP9.68□□□□□ -0.86
CTSB-205ENST00000505496 RNF216Q9NWF9 866 aaPredicted RBP9.68□□□□□ -0.86
CTSB-205ENST00000505496 TTC3P53804 2025 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 MICAL3Q7RTP6 2002 aa9.68□□□□□ -0.86
CTSB-205ENST00000505496 EYSQ5T1H1 3165 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 EVPLQ92817 2033 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 PTPRSQ13332 1948 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 A0A0U1RQF3 1178 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 DENND3A2RUS2 1198 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 YEATS4O95619 227 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 BRD1O95696 1058 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 STAG3L1P0CL83 205 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 SRGAP2CP0DJJ0 459 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 FGFR4P22455 802 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 MARCKSP29966 332 aaPredicted RBP9.67□□□□□ -0.86
CTSB-205ENST00000505496 PHKA2P46019 1235 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 SLC12A3P55017 1021 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 ERVK-21P61565 698 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 MBTD1Q05BQ5 628 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 TFDP1Q14186 410 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 AMHR2Q16671 573 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 RINT1Q6NUQ1 792 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 ZNF598Q86UK7 904 aaKnown RBP9.67□□□□□ -0.86
CTSB-205ENST00000505496 CABP7Q86V35 215 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 LRRC15Q8TF66 581 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 CLP1Q92989 425 aaKnown RBP9.67□□□□□ -0.86
CTSB-205ENST00000505496 FAM161BQ96MY7 647 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 SCLT1Q96NL6 688 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 YME1L1Q96TA2 773 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 TIPINQ9BVW5 301 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 CSRNP2Q9H175 543 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 GPRC5CQ9NQ84 441 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 AGPAT5Q9NUQ2 364 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 TMEM161AQ9NX61 479 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 KCND2Q9NZV8 630 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 STXBP5LQ9Y2K9 1186 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 ZDHHC9Q9Y397 364 aa9.67□□□□□ -0.86
CTSB-205ENST00000505496 EPOPA6NHQ4 379 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 ZNF623O75123 536 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 PPP6R2O75170 966 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 UPP2O95045 317 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 ZSCAN20P17040 1043 aaPredicted RBP9.66□□□□□ -0.86
CTSB-205ENST00000505496 ATF7P17544 494 aaPredicted RBP9.66□□□□□ -0.86
CTSB-205ENST00000505496 POU3F3P20264 500 aaPredicted RBP9.66□□□□□ -0.86
CTSB-205ENST00000505496 GUCY2CP25092 1073 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 AXLP30530 894 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 UBA7P41226 1012 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 BECN1Q14457 450 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 FAM187BQ17R55 369 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 FAM102BQ5T8I3 360 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 FAM117BQ6P1L5 589 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 PPP4R3CPQ6ZMV5 832 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 CATSPER4Q7RTX7 472 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 SPRED2Q7Z698 418 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 ECHDC2Q86YB7 292 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 CMTR2Q8IYT2 770 aaKnown RBP9.66□□□□□ -0.86
CTSB-205ENST00000505496 DAW1Q8N136 415 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 SYT2Q8N9I0 419 aaPredicted RBP9.66□□□□□ -0.86
CTSB-205ENST00000505496 KRI1Q8N9T8 703 aaKnown RBP9.66□□□□□ -0.86
CTSB-205ENST00000505496 SPRYD3Q8NCJ5 442 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 BSNDQ8WZ55 320 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 KIFAP3Q92845 792 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 EPSTI1Q96J88 318 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 ZNF396Q96N95 335 aaPredicted RBP9.66□□□□□ -0.86
CTSB-205ENST00000505496 TGS1Q96RS0 853 aaKnown RBP9.66□□□□□ -0.86
CTSB-205ENST00000505496 RUSC1Q9BVN2 902 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 FZD8Q9H461 694 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 BLOC1S4Q9NUP1 217 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 DACT1Q9NYF0 836 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 PRUNE2Q8WUY3 3088 aa9.66□□□□□ -0.86
CTSB-205ENST00000505496 A0A0C4DFX4 3053 aa9.65□□□□□ -0.86
CTSB-205ENST00000505496 ADGRA3Q8IWK6 1321 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms