RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 NFIAQ12857 509 aa12.88□□□□□ -0.35
UBE3D-206ENST00000505226 CEP57Q86XR8 500 aa12.88□□□□□ -0.35
UBE3D-206ENST00000505226 CENPTQ96BT3 561 aa12.88□□□□□ -0.35
UBE3D-206ENST00000505226 STK33Q9BYT3 514 aa12.88□□□□□ -0.35
UBE3D-206ENST00000505226 KDM4CQ9H3R0 1056 aa12.88□□□□□ -0.35
UBE3D-206ENST00000505226 AZI2Q9H6S1 392 aa12.88□□□□□ -0.35
UBE3D-206ENST00000505226 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.88□□□□□ -0.35
UBE3D-206ENST00000505226 PCDHA3Q9Y5H8 950 aa12.88□□□□□ -0.35
UBE3D-206ENST00000505226 EP400Q96L91 3159 aa12.88□□□□□ -0.35
UBE3D-206ENST00000505226 TRIM37O94972 964 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 MMEP08473 750 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 ATP2B4P23634 1241 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 FMO5P49326 533 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 SCNN1DP51172 638 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 KIAA1755Q5JYT7 1200 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 RINT1Q6NUQ1 792 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 CPNE8Q86YQ8 564 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 FAM186BQ8IYM0 893 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 LRRC34Q8IZ02 419 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 SCLT1Q96NL6 688 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 CARD9Q9H257 536 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 FRMPD4Q14CM0 1322 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 SMCHD1A6NHR9 2005 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 CCT8L1PA6NM43 557 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 ANKRD63C9JTQ0 380 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 RPL13P26373 211 aaKnown RBP12.87□□□□□ -0.35
UBE3D-206ENST00000505226 RPL21P46778 160 aaKnown RBP12.87□□□□□ -0.35
UBE3D-206ENST00000505226 CDR1P51861 262 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 Q4G0T1 1027 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 PHLDB3Q6NSJ2 640 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 PIGWQ7Z7B1 504 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 SIAH1Q8IUQ4 282 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 PRELID2Q8N945 189 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 SLC20A1Q8WUM9 679 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 FIZ1Q96SL8 496 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 RAB17Q9H0T7 212 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 CCNL1Q9UK58 526 aaPredicted RBP12.87□□□□□ -0.35
UBE3D-206ENST00000505226 ADAMTSL1Q8N6G6 1762 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 TCRBV7S2A1N4TA0A589 114 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 MGRN1O60291 552 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 HOXA13P31271 388 aaPredicted RBP12.87□□□□□ -0.35
UBE3D-206ENST00000505226 EIF3BP55884 814 aaKnown RBP12.87□□□□□ -0.35
UBE3D-206ENST00000505226 ELF3P78545 371 aaPredicted RBP12.87□□□□□ -0.35
UBE3D-206ENST00000505226 MAPK7Q13164 816 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 CTTNQ14247 550 aaKnown RBP12.87□□□□□ -0.35
UBE3D-206ENST00000505226 E2F5Q15329 346 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 USH1GQ495M9 461 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 SLF2Q8IX21 1173 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 EPS8L3Q8TE67 593 aaKnown RBP12.87□□□□□ -0.35
UBE3D-206ENST00000505226 RPGRQ92834 1020 aaKnown RBP12.87□□□□□ -0.35
UBE3D-206ENST00000505226 NAP1L4Q99733 375 aaKnown RBP12.87□□□□□ -0.35
UBE3D-206ENST00000505226 SELENOSQ9BQE4 189 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 EIF2AK1Q9BQI3 630 aaKnown RBP12.87□□□□□ -0.35
UBE3D-206ENST00000505226 CNOT10Q9H9A5 744 aaKnown RBP12.87□□□□□ -0.35
UBE3D-206ENST00000505226 USP40Q9NVE5 1235 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 ALG6Q9Y672 507 aa12.87□□□□□ -0.35
UBE3D-206ENST00000505226 GREB1LQ9C091 1923 aaPredicted RBP12.86□□□□□ -0.35
UBE3D-206ENST00000505226 FOXN3O00409 490 aaPredicted RBP12.86□□□□□ -0.35
UBE3D-206ENST00000505226 RIMBP2O15034 1052 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 SLC26A4O43511 780 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 EEF2P13639 858 aaKnown RBP12.86□□□□□ -0.35
UBE3D-206ENST00000505226 LMNB1P20700 586 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 SLCO1A2P46721 670 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
UBE3D-206ENST00000505226 ARHGAP44Q17R89 818 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 NEK9Q8TD19 979 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 CTNNBL1Q8WYA6 563 aaPredicted RBP12.86□□□□□ -0.35
UBE3D-206ENST00000505226 PGM2Q96G03 612 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 PRMT1Q99873 361 aaKnown RBP12.86□□□□□ -0.35
UBE3D-206ENST00000505226 DNAJC8O75937 253 aaPredicted RBP12.86□□□□□ -0.35
UBE3D-206ENST00000505226 RDXP35241 583 aaKnown RBP12.86□□□□□ -0.35
UBE3D-206ENST00000505226 CRY2Q49AN0 593 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 MOXD1Q6UVY6 613 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 ARMC9Q7Z3E5 817 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 SEPT11Q9NVA2 429 aaKnown RBP12.86□□□□□ -0.35
UBE3D-206ENST00000505226 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.86□□□□□ -0.35
UBE3D-206ENST00000505226 C6orf229H3BNL8 230 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 FGFR4P22455 802 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 PSMC2P35998 433 aaKnown RBP12.86□□□□□ -0.35
UBE3D-206ENST00000505226 SPDYCQ5MJ68 293 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 CDC42EP5Q6NZY7 148 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 CCDC197Q8NCU1 140 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 ERMNQ8TAM6 284 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 TBC1D22AQ8WUA7 517 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 OLFML3Q9NRN5 406 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 RABGAP1Q9Y3P9 1069 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 PCDHAC2Q9Y5I4 1007 aa12.86□□□□□ -0.35
UBE3D-206ENST00000505226 TBCAO75347 108 aaKnown RBP12.85□□□□□ -0.35
UBE3D-206ENST00000505226 EYA4O95677 639 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 GHRP10912 638 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 CYP2J2P51589 502 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 NEDD9Q14511 834 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 CCDC38Q502W7 563 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 MYCT1Q8N699 235 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 LMO3Q8TAP4 145 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 INTS2Q9H0H0 1204 aaKnown RBP12.85□□□□□ -0.35
UBE3D-206ENST00000505226 DBR1Q9UK59 544 aaKnown RBP12.85□□□□□ -0.35
UBE3D-206ENST00000505226 SLC12A4Q9UP95 1085 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 AGAP1Q9UPQ3 857 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 FOXO6A8MYZ6 492 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms