RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 CREBRFQ8IUR6 639 aa13.12□□□□□ -0.31
POLR2J3-210ENST00000504677 SLC9A9Q8IVB4 645 aa13.12□□□□□ -0.31
POLR2J3-210ENST00000504677 MAP4K3Q8IVH8 894 aa13.12□□□□□ -0.31
POLR2J3-210ENST00000504677 TMEM161BQ8NDZ6 487 aa13.12□□□□□ -0.31
POLR2J3-210ENST00000504677 IQCDQ96DY2 449 aa13.12□□□□□ -0.31
POLR2J3-210ENST00000504677 NOC4LQ9BVI4 516 aaKnown RBP13.12□□□□□ -0.31
POLR2J3-210ENST00000504677 VPS16Q9H269 839 aa13.12□□□□□ -0.31
POLR2J3-210ENST00000504677 POLD4Q9HCU8 107 aa13.12□□□□□ -0.31
POLR2J3-210ENST00000504677 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.12□□□□□ -0.31
POLR2J3-210ENST00000504677 ZSWIM8A7E2V4 1837 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 IGKV6-21A0A0C4DH24 114 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 DENND3A2RUS2 1198 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 A6NJR5 290 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 MAGEB2O15479 319 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 TGFB1I1O43294 461 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 ECM2O94769 699 aaPredicted RBP13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 TPM1P09493 284 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 PBX1P40424 430 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 FLT3LGP49771 235 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 UBXN1Q04323 297 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 MXD4Q14582 209 aaPredicted RBP13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 GJC2Q5T442 439 aaPredicted RBP13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 RETREG2Q8NC44 543 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 PSPC1Q8WXF1 523 aaKnown RBP13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 AP5M1Q9H0R1 490 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 AGPAT3Q9NRZ7 376 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 RNF186Q9NXI6 227 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 SAGE1Q9NXZ1 904 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 ARHGAP28Q9P2N2 729 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 TBX20Q9UMR3 447 aa13.11□□□□□ -0.31
POLR2J3-210ENST00000504677 ZBTB42B2RXF5 422 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 H3BRB1 525 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 PES1O00541 588 aaKnown RBP13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 PTGS1P23219 599 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 SFPQP23246 707 aaKnown RBP eCLIP13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 PSMC2P35998 433 aaKnown RBP13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 VEGFBP49765 207 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 EFNA5P52803 228 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 PRKCZQ05513 592 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 KCNA1Q09470 495 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 STRN3Q13033 797 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 TFDP1Q14186 410 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 VWA3BQ502W6 1294 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 ZSCAN30Q86W11 494 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 TRIM59Q8IWR1 403 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 DEPTORQ8TB45 409 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 BSNDQ8WZ55 320 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 C16orf70Q9BSU1 422 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 ARHGAP39Q9C0H5 1083 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 C2orf40Q9H1Z8 148 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 TUT1Q9H6E5 874 aaKnown RBP13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 ARMCX3Q9UH62 379 aaPredicted RBP13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 FRMD4BQ9Y2L6 1034 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 ZKSCAN5Q9Y2L8 839 aa13.1□□□□□ -0.31
POLR2J3-210ENST00000504677 KIAA0391O15091 583 aaKnown RBP13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 MAPK13O15264 365 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 ASAP2O43150 1006 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 DYNC1LI2O43237 492 aaPredicted RBP13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 TEX33O43247 280 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 KPNA6O60684 536 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 DUSP11O75319 330 aaKnown RBP13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 TBC1D8O95759 1140 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 F2P00734 622 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 ZNF286BP0CG31 522 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 CYBAP13498 195 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 GLRA2P23416 452 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 MSNP26038 577 aaKnown RBP13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 TBX2Q13207 712 aaPredicted RBP13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 MIIPQ5JXC2 388 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 PRAMEF19Q5SWL8 479 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 PPFIBP1Q86W92 1011 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 CCDC112Q8NEF3 446 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 ASAP3Q8TDY4 903 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 TRIB2Q92519 343 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 TMEM143Q96AN5 459 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 ERGIC2Q96RQ1 377 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 NUP58Q9BVL2 599 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 KATNAL1Q9BW62 490 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 NDST4Q9H3R1 872 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 TMEM134Q9H6X4 195 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 DMAC2Q9NW81 257 aa13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.09□□□□□ -0.31
POLR2J3-210ENST00000504677 RRN3P2A6NIE6 340 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 LRRIQ4A6NIV6 560 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 CLIC2O15247 247 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 ADCY6O43306 1168 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 TRPA1O75762 1119 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 C22orf31O95567 290 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 INSRRP14616 1297 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 TMOD1P28289 359 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 PRMT2P55345 433 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 SOX10P56693 466 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 PPFIA1Q13136 1202 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 CEP135Q66GS9 1140 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 CDCA2Q69YH5 1023 aaPredicted RBP13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 ARMCX5Q6P1M9 558 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 CNGA4Q8IV77 575 aa13.08□□□□□ -0.32
POLR2J3-210ENST00000504677 ZBTB8OSQ8IWT0 167 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms