RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 A0A0A6YYK5 440 aaPredicted RBP10.69□□□□□ -0.7
COL1A1-210ENST00000504289 A0A0U1RQJ8 604 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 RCCD1A6NED2 376 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 CLIC2O15247 247 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 STBD1O95210 358 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 SUPT20HL2P0C7V6 817 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 SLC9A1P19634 815 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 CYP27A1Q02318 531 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 KCNA1Q09470 495 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 PPIL2Q13356 520 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 DGKZQ13574 1117 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 NEDD9Q14511 834 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 NAB2Q15742 525 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 BRDTQ58F21 947 aaPredicted RBP10.69□□□□□ -0.7
COL1A1-210ENST00000504289 DCAF17Q5H9S7 520 aaPredicted RBP10.69□□□□□ -0.7
COL1A1-210ENST00000504289 FBXO38Q6PIJ6 1188 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 TMCO3Q6UWJ1 677 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 ANO5Q75V66 913 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 ANKRD35Q8N283 1001 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 MSL3Q8N5Y2 521 aaKnown RBP10.69□□□□□ -0.7
COL1A1-210ENST00000504289 TMC2Q8TDI7 906 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 ATRIPQ8WXE1 791 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 CRACR2AQ9BSW2 395 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 SYT17Q9BSW7 474 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 KIAA1586Q9HCI6 787 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 SIX2Q9NPC8 291 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 GCNT4Q9P109 453 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 DDX41Q9UJV9 622 aaKnown RBP10.69□□□□□ -0.7
COL1A1-210ENST00000504289 RAB21Q9UL25 225 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 MAFBQ9Y5Q3 323 aaPredicted RBP10.69□□□□□ -0.7
COL1A1-210ENST00000504289 WDR90Q96KV7 1748 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 IGKV6D-21A0A0A0MT36 114 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 TARSL2A2RTX5 802 aaKnown RBP10.68□□□□□ -0.7
COL1A1-210ENST00000504289 CES2O00748 559 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 BACH1O14867 736 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 ERLIN1O75477 346 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 DDNO94850 711 aaPredicted RBP10.68□□□□□ -0.7
COL1A1-210ENST00000504289 ABL1P00519 1130 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 PLEKP08567 350 aaPredicted RBP10.68□□□□□ -0.7
COL1A1-210ENST00000504289 GARTP22102 1010 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 RFC5P40937 340 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 VAMP7P51809 220 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 NPEPPSP55786 919 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 ACTR2P61160 394 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 IRX3P78415 501 aaPredicted RBP10.68□□□□□ -0.7
COL1A1-210ENST00000504289 NAA30Q147X3 362 aaPredicted RBP10.68□□□□□ -0.7
COL1A1-210ENST00000504289 UGCGQ16739 394 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 PRAMEF18Q5VWM3 479 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 TMEM161BQ8NDZ6 487 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 LMBR1Q8WVP7 490 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 ZFP91Q96JP5 570 aaPredicted RBP10.68□□□□□ -0.7
COL1A1-210ENST00000504289 CEP170P1Q96L14 293 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 IFT74Q96LB3 600 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 FBXL18Q96ME1 805 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 NIFKQ9BYG3 293 aaKnown RBP10.68□□□□□ -0.7
COL1A1-210ENST00000504289 FHDC1Q9C0D6 1143 aaPredicted RBP10.68□□□□□ -0.7
COL1A1-210ENST00000504289 SPATC1LQ9H0A9 340 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 ATP6V0A4Q9HBG4 840 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 RNF181Q9P0P0 153 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 GABBR1Q9UBS5 961 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 APEX2Q9UBZ4 518 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 TBX20Q9UMR3 447 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 NENFQ9UMX5 172 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 SNX12Q9UMY4 172 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 AGTPBP1Q9UPW5 1226 aa10.68□□□□□ -0.7
COL1A1-210ENST00000504289 WDR81Q562E7 1941 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 KIAA1217Q5T5P2 1943 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 GAS2O43903 313 aaKnown RBP10.67□□□□□ -0.7
COL1A1-210ENST00000504289 OSBPP22059 807 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 SOX5P35711 763 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 NPTX2P47972 431 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 CYP2J2P51589 502 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 ALDH5A1P51649 535 aaPredicted RBP10.67□□□□□ -0.7
COL1A1-210ENST00000504289 PEX3P56589 373 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 FAM193AP78312 1265 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 MYL7Q01449 175 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 PLS1Q14651 629 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 TEX35Q5T0J7 233 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 FAM102BQ5T8I3 360 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 FAM160B1Q5W0V3 765 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 CCDC70Q6NSX1 233 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 SWSAP1Q6NVH7 229 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 WDR93Q6P2C0 686 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 ARMC9Q7Z3E5 817 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 FAM133AQ8N9E0 248 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 SHCBP1Q8NEM2 672 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 AFAP1L1Q8TED9 768 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 FAM167AQ96KS9 214 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 INTS2Q9H0H0 1204 aaKnown RBP10.67□□□□□ -0.7
COL1A1-210ENST00000504289 MROH8Q9H579 483 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 ARFGAP3Q9NP61 516 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 KMT5AQ9NQR1 393 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 CYP26B1Q9NR63 512 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 NRBP2Q9NSY0 501 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 FAM53CQ9NYF3 392 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 HSPBP1Q9NZL4 362 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 COQ4Q9Y3A0 265 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 HYOU1Q9Y4L1 999 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 PCDHGC5Q9Y5F6 944 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms