RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 A0A1B0GUA9 196 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 EIF3HO15372 352 aaKnown RBP eCLIP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CHMP2AO43633 222 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 KATNA1O75449 491 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 PIK3CAP42336 1068 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 PPM1FP49593 454 aaPredicted RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 FXR1P51114 621 aaKnown RBP eCLIP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 SCNN1DP51172 638 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 PMS2P54278 862 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 IFITM2Q01629 132 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CTDSPL2Q05D32 466 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 TNIP1Q15025 636 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 P3H1Q32P28 736 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 LRRC23Q53EV4 343 aaPredicted RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 IL23RQ5VWK5 629 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 USPL1Q5W0Q7 1092 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 KRT79Q5XKE5 535 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ARMCX5Q6P1M9 558 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 SEPT14Q6ZU15 432 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 LCA5Q86VQ0 697 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ZNF354CQ86Y25 554 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 FMR1NBQ8N0W7 255 aaPredicted RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 TMCO5AQ8N6Q1 288 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 USP38Q8NB14 1042 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 SUN5Q8TC36 379 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 BCAS4Q8TDM0 211 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 PEX13Q92968 403 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CDC5LQ99459 802 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 PLEKHA5Q9HAU0 1116 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 FANCEQ9HB96 536 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ZFYVE28Q9HCC9 887 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CCDC87Q9NVE4 849 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 FANCLQ9NW38 375 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 RMND1Q9NWS8 449 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 SAMD15Q9P1V8 674 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 SAP30BPQ9UHR5 308 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ANKRD36CQ5JPF3 1778 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ATRXP46100 2492 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 IGF2BP3O00425 579 aaKnown RBP eCLIP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ACTN4O43707 911 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CCNT1O60563 726 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 STAM2O75886 525 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 STAMBPO95630 424 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 MSL3P1P0C860 447 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 PTPN2P17706 415 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ALAS2P22557 587 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 IL15P40933 162 aaPredicted RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 PPP2R5CQ13362 524 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 RIPK1Q13546 671 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 KRT71Q3SY84 523 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CCDC14Q49A88 953 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 KRT40Q6A162 431 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 TRIM68Q6AZZ1 485 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 TYW1BQ6NUM6 668 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 VSIG1Q86XK7 387 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 TREML1Q86YW5 311 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CNGA4Q8IV77 575 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ALDH16A1Q8IZ83 802 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 LSMEM1Q8N8F7 131 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 DTX3Q8N9I9 347 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 GIPC2Q8TF65 315 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ARHGEF2Q92974 986 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 FERMT2Q96AC1 680 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CCDC127Q96BQ5 260 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 PSKH2Q96QS6 385 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 SGIP1Q9BQI5 828 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 NEURL2Q9BR09 285 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CRNKL1Q9BZJ0 848 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 FAM114A2Q9NRY5 505 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 VPS54Q9P1Q0 977 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 SERTAD1Q9UHV2 236 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 RNF112Q9ULX5 631 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 MTMR6Q9Y217 621 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 MYH8P13535 1937 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 KIAA1217Q5T5P2 1943 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 TRAV6A0A075B6T7 132 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 KRBA1A5PL33 1030 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 EIF4E1BA6NMX2 242 aaKnown RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 LACTBL1A8MY62 500 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 RASA4BC9J798 803 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 TXNDC9O14530 226 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 RIMBP2O15034 1052 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 BUB1O43683 1085 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 LARGE1O95461 756 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 DESP17661 470 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 SP100P23497 879 aaPredicted RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 CDC25AP30304 524 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ZNF131P52739 623 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ARPC4P59998 168 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ALS2CLQ60I27 953 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 KAZNQ674X7 775 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 PPP1R21Q6ZMI0 780 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 RSPH3Q86UC2 560 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 SMYD4Q8IYR2 804 aaPredicted RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ARFGAP2Q8N6H7 521 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 TBC1D31Q96DN5 1066 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 RBM18Q96H35 190 aaKnown RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 SMC6Q96SB8 1091 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 CCDC77Q9BR77 488 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 KRT23Q9C075 422 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms