RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 SMIM24O75264 130 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 SLC4A1P02730 911 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 EXOSC10Q01780 885 aaKnown RBP17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 CCDC144BQ3MJ40 725 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 C2orf40Q9H1Z8 148 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 ANGPTL2Q9UKU9 493 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 ZDHHC9Q9Y397 364 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 ORC6Q9Y5N6 252 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 TTC26A0AVF1 554 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 POTEFA5A3E0 1075 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 KRT38O76015 456 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 MMEP08473 750 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 POTEIP0CG38 1075 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 EPHB1P54762 984 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 ZNF394Q53GI3 561 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 TAF1BQ53T94 588 aaPredicted RBP17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 PPP6R3Q5H9R7 873 aaPredicted RBP17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 POTEGQ6S5H5 508 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 POTEEQ6S8J3 1075 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 ADAMTS13Q76LX8 1427 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 CRLF3Q8IUI8 442 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 FAM84BQ96KN1 310 aaPredicted RBP17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 RNF146Q9NTX7 359 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 F8W8V4 182 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 CHEK2O96017 543 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 FDX1P10109 184 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 PAMP19021 973 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 NCF2P19878 526 aaPredicted RBP17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 PMLP29590 882 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 PPARGP37231 505 aaPredicted RBP17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 GPC3P51654 580 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 E2F5Q15329 346 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 ZNF568Q3ZCX4 644 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 TMTC4Q5T4D3 741 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 HIBCHQ6NVY1 386 aaPredicted RBP17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 ENOSF1Q7L5Y1 443 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 ZNF564Q8TBZ8 553 aaPredicted RBP17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 MAML1Q92585 1016 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 ZNF302Q9NR11 478 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 KIF28PB7ZC32 967 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 COPEO14579 308 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 MYBL1P10243 752 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 GNAT1P11488 350 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 DRAP1Q14919 205 aaPredicted RBP17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 PSPC1Q8WXF1 523 aaKnown RBP17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 PLA2G12BQ9BX93 195 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 FIS1Q9Y3D6 152 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 ZHX2Q9Y6X8 837 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 PSMC5P62195 406 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 PDLIM2Q96JY6 352 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 FAM8A1Q9UBU6 413 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 PACSIN2Q9UNF0 486 aaPredicted RBP17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 SPECC1L-ADORA2AF8WAN1 911 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 SKIP12755 728 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 SUGT1Q9Y2Z0 365 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 IQGAP1P46940 1657 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 UBE4BO95155 1302 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 MAP3K7O43318 606 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 CHRNA3P32297 505 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 KLHL38Q2WGJ6 581 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 MYCBPQ99417 103 aaPredicted RBP17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 HEMGNQ9BXL5 484 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 CYP26B1Q9NR63 512 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 FAF1Q9UNN5 650 aaPredicted RBP17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 CRB1P82279 1406 aa17.66■□□□□ 0.42
PCDHA1-203ENST00000504120 GSTA4O15217 222 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 TEX33O43247 280 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 RPSAP08865 295 aaKnown RBP17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 TAC1P20366 129 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 MRPS25P82663 173 aaKnown RBP17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 RSBN1LQ6PCB5 846 aaPredicted RBP17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 ATG9AQ7Z3C6 839 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 PRPF38AQ8NAV1 312 aaKnown RBP17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 C11orf70Q9BRQ4 267 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 NUP85Q9BW27 656 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 TRIM55Q9BYV6 548 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 GUCY2CP25092 1073 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 IL1RL1Q01638 556 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 WDR75Q8IWA0 830 aaKnown RBP17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 TTC39CQ8N584 583 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 TDP2O95551 362 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 THEM5Q8N1Q8 247 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 ELAC2Q9BQ52 826 aaKnown RBP17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 NEURL4Q96JN8 1562 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 FAM196BA6NMK8 535 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 PP2D1A8MPX8 630 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 RASA4BC9J798 803 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 RASA4O43374 803 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 ESRRGP62508 458 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 PDIA5Q14554 519 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 TRIM67Q6ZTA4 783 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 WRNIP1Q96S55 665 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 FAM96AQ9H5X1 160 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 ADAM21Q9UKJ8 722 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 PFASO15067 1338 aa17.65■□□□□ 0.42
PCDHA1-203ENST00000504120 GPSM2P81274 684 aa17.64■□□□□ 0.42
PCDHA1-203ENST00000504120 RWDD4Q6NW29 188 aaKnown RBP17.64■□□□□ 0.42
PCDHA1-203ENST00000504120 FRMD5Q7Z6J6 570 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms