RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 TMEM174Q8WUU8 243 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 ACAD9Q9H845 621 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 NAGPAQ9UK23 515 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 UTRNP46939 3433 aa24.51■■□□□ 1.51
PCDH1-204ENST00000503492 NCKAP1LP55160 1127 aa24.51■■□□□ 1.51
PCDH1-204ENST00000503492 MYL7Q01449 175 aa24.51■■□□□ 1.51
PCDH1-204ENST00000503492 C2orf54Q08AI8 447 aa24.51■■□□□ 1.51
PCDH1-204ENST00000503492 FAM102BQ5T8I3 360 aa24.51■■□□□ 1.51
PCDH1-204ENST00000503492 ZNF572Q7Z3I7 529 aaPredicted RBP24.51■■□□□ 1.51
PCDH1-204ENST00000503492 INTS2Q9H0H0 1204 aaKnown RBP24.51■■□□□ 1.51
PCDH1-204ENST00000503492 DNAJC12Q9UKB3 198 aa24.51■■□□□ 1.51
PCDH1-204ENST00000503492 NENFQ9UMX5 172 aa24.51■■□□□ 1.51
PCDH1-204ENST00000503492 TELO2Q9Y4R8 837 aa24.51■■□□□ 1.51
PCDH1-204ENST00000503492 WDR81Q562E7 1941 aa24.51■■□□□ 1.51
PCDH1-204ENST00000503492 GFPT2O94808 682 aa24.51■■□□□ 1.51
PCDH1-204ENST00000503492 STAT1P42224 750 aa24.51■■□□□ 1.51
PCDH1-204ENST00000503492 DLG4P78352 724 aa24.51■■□□□ 1.51
PCDH1-204ENST00000503492 PCDHGC5Q9Y5F6 944 aa24.51■■□□□ 1.51
PCDH1-204ENST00000503492 MAP2K7O14733 419 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 USP2O75604 605 aaPredicted RBP24.5■■□□□ 1.51
PCDH1-204ENST00000503492 FERP16591 822 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 SUPT20HL1Q3ZLR7 823 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 ALKBH5Q6P6C2 394 aaKnown RBP24.5■■□□□ 1.51
PCDH1-204ENST00000503492 DNAAF5Q86Y56 855 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 ZSWIM2Q8NEG5 633 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 STK33Q9BYT3 514 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 UBXN6Q9BZV1 441 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 HOXC10Q9NYD6 342 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 GABBR1Q9UBS5 961 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 L1RE1Q9UN81 338 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 BTNL10A8MVZ5 291 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 F8VZ95 297 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 ZNF862O60290 1169 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 ANXA13P27216 316 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 DLK2Q6UY11 383 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 SUGCTQ9HAC7 445 aa24.5■■□□□ 1.51
PCDH1-204ENST00000503492 EVI5O60447 810 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 KRT13P13646 458 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 SOX5P35711 763 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 DRAP1Q14919 205 aaPredicted RBP24.49■■□□□ 1.51
PCDH1-204ENST00000503492 INTS8Q75QN2 995 aaKnown RBP24.49■■□□□ 1.51
PCDH1-204ENST00000503492 GPR88Q9GZN0 384 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 HSPBP1Q9NZL4 362 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 DOCK5Q9H7D0 1870 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 STBD1O95210 358 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 FTCDO95954 541 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 SH3D19Q5HYK7 790 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 OLIG1Q8TAK6 271 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 LMO3Q8TAP4 145 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 SMARCAL1Q9NZC9 954 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 EHD2Q9NZN4 543 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 TSKSQ9UJT2 592 aa24.49■■□□□ 1.51
PCDH1-204ENST00000503492 WDR90Q96KV7 1748 aa24.48■■□□□ 1.51
PCDH1-204ENST00000503492 DICER1Q9UPY3 1922 aaKnown RBP24.48■■□□□ 1.51
PCDH1-204ENST00000503492 DDX3XO00571 662 aaKnown RBP eCLIP24.48■■□□□ 1.51
PCDH1-204ENST00000503492 LMNB1P20700 586 aa24.48■■□□□ 1.51
PCDH1-204ENST00000503492 XXYLT1Q8NBI6 393 aa24.48■■□□□ 1.51
PCDH1-204ENST00000503492 APEX2Q9UBZ4 518 aa24.48■■□□□ 1.51
PCDH1-204ENST00000503492 EMSYQ7Z589 1322 aa24.48■■□□□ 1.51
PCDH1-204ENST00000503492 MYPNQ86TC9 1320 aa24.48■■□□□ 1.51
PCDH1-204ENST00000503492 TARSL2A2RTX5 802 aaKnown RBP24.47■■□□□ 1.51
PCDH1-204ENST00000503492 GRID2IPA4D2P6 1211 aa24.47■■□□□ 1.51
PCDH1-204ENST00000503492 VAMP7P51809 220 aa24.47■■□□□ 1.51
PCDH1-204ENST00000503492 ITIH3Q06033 890 aa24.47■■□□□ 1.51
PCDH1-204ENST00000503492 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.47■■□□□ 1.51
PCDH1-204ENST00000503492 SPATA4Q8NEY3 305 aa24.47■■□□□ 1.51
PCDH1-204ENST00000503492 SNCAIPQ9Y6H5 919 aa24.47■■□□□ 1.51
PCDH1-204ENST00000503492 LCTP09848 1927 aa24.47■■□□□ 1.51
PCDH1-204ENST00000503492 GABPB1Q06547 395 aaPredicted RBP24.47■■□□□ 1.51
PCDH1-204ENST00000503492 PPP3CAQ08209 521 aa24.47■■□□□ 1.51
PCDH1-204ENST00000503492 C1orf220Q5T0J3 134 aa24.47■■□□□ 1.51
PCDH1-204ENST00000503492 PHLDB3Q6NSJ2 640 aa24.47■■□□□ 1.51
PCDH1-204ENST00000503492 MMGT1Q8N4V1 131 aa24.47■■□□□ 1.51
PCDH1-204ENST00000503492 PLEKHO2Q8TD55 490 aa24.47■■□□□ 1.51
PCDH1-204ENST00000503492 NFASCO94856 1347 aa24.47■■□□□ 1.51
PCDH1-204ENST00000503492 NPTX2P47972 431 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 SP4Q02446 784 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 MEI1Q5TIA1 1274 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 SWSAP1Q6NVH7 229 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 OTUD6AQ7L8S5 288 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 VPS36Q86VN1 386 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 TMEM161BQ8NDZ6 487 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 CEP170P1Q96L14 293 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 IWS1Q96ST2 819 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 KIFC3Q9BVG8 833 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 JPH1Q9HDC5 661 aaPredicted RBP24.46■■□□□ 1.51
PCDH1-204ENST00000503492 CCDC169A6NNP5 214 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 SOX10P56693 466 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 SNRPFP62306 86 aaKnown RBP24.46■■□□□ 1.51
PCDH1-204ENST00000503492 VGLL4Q14135 290 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 HDXQ7Z353 690 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 SLC17A8Q8NDX2 589 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 LNX1Q8TBB1 728 aaPredicted RBP24.46■■□□□ 1.51
PCDH1-204ENST00000503492 BSNDQ8WZ55 320 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 ATP6V0A1Q93050 837 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 SLC9A2Q9UBY0 812 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 TBX20Q9UMR3 447 aa24.46■■□□□ 1.51
PCDH1-204ENST00000503492 SPATA31C2B4DYI2 1134 aa24.45■■□□□ 1.51
PCDH1-204ENST00000503492 PSAPP07602 524 aa24.45■■□□□ 1.51
PCDH1-204ENST00000503492 SLC30A5Q8TAD4 765 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms