RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 MTIF2P46199 727 aaKnown RBP8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 EFNA5P52803 228 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 COPB1P53618 953 aaKnown RBP8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 NKX3-2P78367 333 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 PRKCZQ05513 592 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 POU5F1BQ06416 359 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 STRN3Q13033 797 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 TRIM14Q14142 442 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 TFDP1Q14186 410 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 NR1I3Q14994 352 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 MAN2A1Q16706 1144 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 CCDC40Q4G0X9 1142 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 FKBP15Q5T1M5 1219 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 SPECC1LQ69YQ0 1117 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 LRRC55Q6ZSA7 311 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 FRMD5Q7Z6J6 570 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 MAP4K3Q8IVH8 894 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 VSTM4Q8IW00 320 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 TMEM161BQ8NDZ6 487 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 GLIS3Q8NEA6 775 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 DEPTORQ8TB45 409 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 PXYLP1Q8TE99 480 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 TUBGCP2Q9BSJ2 902 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 C16orf70Q9BSU1 422 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 NOC4LQ9BVI4 516 aaKnown RBP8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 FGFBP2Q9BYJ0 223 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 C2orf40Q9H1Z8 148 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 TMEM134Q9H6X4 195 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 RTN4Q9NQC3 1192 aaKnown RBP8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 ARHGAP28Q9P2N2 729 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 TBX20Q9UMR3 447 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 FRMD4BQ9Y2L6 1034 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 TELO2Q9Y4R8 837 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 ITIH6Q6UXX5 1313 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 CASP8AP2Q9UKL3 1982 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 DOCK3Q8IZD9 2030 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 WDR81Q562E7 1941 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 MGAMO43451 1857 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 NRCAMQ92823 1304 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 LGALS16A8MUM7 142 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 MAPK13O15264 365 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 SLC16A4O15374 487 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 SEPT4O43236 478 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 MSCO60682 206 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 F2P00734 622 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 HMGCRP04035 888 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 NR3C1P04150 777 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 RARBP10826 455 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 GNAT1P11488 350 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 INSRRP14616 1297 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 PSMC2P35998 433 aaKnown RBP8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 GJA9P57773 515 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 PRAMEF19Q5SWL8 479 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 GJC2Q5T442 439 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 APTXQ7Z2E3 356 aaKnown RBP8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 USP37Q86T82 979 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 TRIM50Q86XT4 487 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 IRF2BP1Q8IU81 584 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 CREBRFQ8IUR6 639 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 ZBTB8OSQ8IWT0 167 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 CCDC150Q8NCX0 1101 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 RAET1EQ8TD07 263 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 TRIB2Q92519 343 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 NAP1L5Q96NT1 182 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 SH2D3AQ9BRG2 576 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 ARHGAP39Q9C0H5 1083 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 GPRC5CQ9NQ84 441 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 AGPAT3Q9NRZ7 376 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 GABRQQ9UN88 632 aa8.92□□□□□ -0.98
TOPBP1-202ENST00000503338 DOCK5Q9H7D0 1870 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 THSD7BQ9C0I4 1608 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 DENND3A2RUS2 1198 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 LRRIQ4A6NIV6 560 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 ZBTB42B2RXF5 422 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 K7ERI5 159 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 TGFB1I1O43294 461 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 ADCY3O60266 1144 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 ECM2O94769 699 aaPredicted RBP8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 C22orf31O95567 290 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 PIGRP01833 764 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 RPLP2P05387 115 aaKnown RBP8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 GARTP22102 1010 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 GLRA2P23416 452 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 HOXD13P35453 343 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 UBXN1Q04323 297 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 ENPEPQ07075 957 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 PPFIA1Q13136 1202 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 FSCN1Q16658 493 aaKnown RBP8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 VWA3BQ502W6 1294 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 ZC2HC1CQ53FD0 456 aaPredicted RBP8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 HSP90AA4PQ58FG1 418 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 SLFN12LQ6IEE8 588 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 EFCAB12Q6NXP0 572 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 ARMCX5Q6P1M9 558 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 TMC6Q7Z403 805 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 SPC24Q8NBT2 197 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 SLAIN1Q8ND83 568 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 CD99L2Q8TCZ2 262 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 TMEM143Q96AN5 459 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms