RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 MKL1Q969V6 931 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 IKZF4Q9H2S9 585 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 GOPCQ9HD26 462 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 FRMPD4Q14CM0 1322 aa26.52■■□□□ 1.84
DDX41-202ENST00000503078 FAM13AO94988 1023 aa26.52■■□□□ 1.84
DDX41-202ENST00000503078 FOSP01100 380 aaPredicted RBP26.52■■□□□ 1.84
DDX41-202ENST00000503078 SLURP2P0DP57 97 aa26.52■■□□□ 1.84
DDX41-202ENST00000503078 EEF2P13639 858 aaKnown RBP26.52■■□□□ 1.84
DDX41-202ENST00000503078 KIAA1755Q5JYT7 1200 aa26.52■■□□□ 1.84
DDX41-202ENST00000503078 TAX1BP1Q86VP1 789 aa26.52■■□□□ 1.84
DDX41-202ENST00000503078 CERS5Q8N5B7 392 aa26.52■■□□□ 1.84
DDX41-202ENST00000503078 PGM2Q96G03 612 aa26.52■■□□□ 1.84
DDX41-202ENST00000503078 KDM4CQ9H3R0 1056 aa26.52■■□□□ 1.84
DDX41-202ENST00000503078 TRPC5Q9UL62 973 aaPredicted RBP26.52■■□□□ 1.84
DDX41-202ENST00000503078 CTNND1O60716 968 aaKnown RBP26.51■■□□□ 1.84
DDX41-202ENST00000503078 TNFAIP3P21580 790 aa26.51■■□□□ 1.84
DDX41-202ENST00000503078 NMT1P30419 496 aaKnown RBP26.51■■□□□ 1.84
DDX41-202ENST00000503078 DRG2P55039 364 aaKnown RBP26.51■■□□□ 1.84
DDX41-202ENST00000503078 ZNF211Q13398 564 aaPredicted RBP26.51■■□□□ 1.84
DDX41-202ENST00000503078 SLC15A2Q16348 729 aa26.51■■□□□ 1.84
DDX41-202ENST00000503078 JAMLQ86YT9 394 aa26.51■■□□□ 1.84
DDX41-202ENST00000503078 PARP9Q8IXQ6 854 aa26.51■■□□□ 1.84
DDX41-202ENST00000503078 SGSM3Q96HU1 749 aa26.51■■□□□ 1.84
DDX41-202ENST00000503078 THAP2Q9H0W7 228 aa26.51■■□□□ 1.84
DDX41-202ENST00000503078 HAUS2Q9NVX0 235 aa26.51■■□□□ 1.84
DDX41-202ENST00000503078 RGL1Q9NZL6 768 aa26.51■■□□□ 1.84
DDX41-202ENST00000503078 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.51■■□□□ 1.83
DDX41-202ENST00000503078 GHRP10912 638 aa26.51■■□□□ 1.83
DDX41-202ENST00000503078 POLD1P28340 1107 aa26.51■■□□□ 1.83
DDX41-202ENST00000503078 CIITAP33076 1130 aa26.51■■□□□ 1.83
DDX41-202ENST00000503078 SNCBQ16143 134 aa26.51■■□□□ 1.83
DDX41-202ENST00000503078 DENND2CQ68D51 928 aa26.51■■□□□ 1.83
DDX41-202ENST00000503078 CDC42EP5Q6NZY7 148 aa26.51■■□□□ 1.83
DDX41-202ENST00000503078 RPAINQ86UA6 219 aa26.51■■□□□ 1.83
DDX41-202ENST00000503078 KCTD17Q8N5Z5 321 aa26.51■■□□□ 1.83
DDX41-202ENST00000503078 MYCT1Q8N699 235 aa26.51■■□□□ 1.83
DDX41-202ENST00000503078 ANKRD62A6NC57 917 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 EML1O00423 815 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 KIAA0391O15091 583 aaKnown RBP26.5■■□□□ 1.83
DDX41-202ENST00000503078 PLTPP55058 493 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 MAPK7Q13164 816 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 CCDC50Q8IVM0 306 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.5■■□□□ 1.83
DDX41-202ENST00000503078 RASAL2Q9UJF2 1139 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 QSER1Q2KHR3 1735 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 LOC102724159A0A0B4J2E5 919 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 CCDC169A6NNP5 214 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 PWP2Q15269 919 aaKnown RBP26.5■■□□□ 1.83
DDX41-202ENST00000503078 CBWD6Q4V339 395 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 ZC2HC1CQ53FD0 456 aaPredicted RBP26.5■■□□□ 1.83
DDX41-202ENST00000503078 CBWD3Q5JTY5 395 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 CBWD5Q5RIA9 395 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 ZDHHC24Q6UX98 284 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 ALG3Q92685 438 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 HVCN1Q96D96 273 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 INTS2Q9H0H0 1204 aaKnown RBP26.5■■□□□ 1.83
DDX41-202ENST00000503078 TAS2R14Q9NYV8 317 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 NYAP2Q9P242 653 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 COG5Q9UP83 839 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 SNX24Q9Y343 169 aa26.5■■□□□ 1.83
DDX41-202ENST00000503078 RIMBP2O15034 1052 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 CHN1P15882 459 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 VCAM1P19320 739 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 HSPA1LP34931 641 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 MMP13P45452 471 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 XRCC4Q13426 336 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 PREPLQ4J6C6 727 aaPredicted RBP26.49■■□□□ 1.83
DDX41-202ENST00000503078 RNF25Q96BH1 459 aaPredicted RBP26.49■■□□□ 1.83
DDX41-202ENST00000503078 ZNF317Q96PQ6 595 aaPredicted RBP26.49■■□□□ 1.83
DDX41-202ENST00000503078 TACO1Q9BSH4 297 aaKnown RBP26.49■■□□□ 1.83
DDX41-202ENST00000503078 COA1Q9GZY4 146 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 DNAJC18Q9H819 358 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 SEPT11Q9NVA2 429 aaKnown RBP26.49■■□□□ 1.83
DDX41-202ENST00000503078 APEX2Q9UBZ4 518 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 UBR3Q6ZT12 1888 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 SNAP25P60880 206 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 FBXO25Q8TCJ0 367 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 PIGOQ8TEQ8 1089 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 CXorf56Q9H5V9 222 aa26.49■■□□□ 1.83
DDX41-202ENST00000503078 SCNN1DP51172 638 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 COG2Q14746 738 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 USH1GQ495M9 461 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 FBXO11Q86XK2 927 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 CCDC197Q8NCU1 140 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 CYP2W1Q8TAV3 490 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 ATP2C2O75185 946 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 DNAJC8O75937 253 aaPredicted RBP26.48■■□□□ 1.83
DDX41-202ENST00000503078 MMEP08473 750 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 MMP14P50281 582 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 C1orf186Q6ZWK4 172 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 PALB2Q86YC2 1186 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 RHOT2Q8IXI1 618 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 TMOD4Q9NZQ9 345 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 FRMD4BQ9Y2L6 1034 aa26.48■■□□□ 1.83
DDX41-202ENST00000503078 SYNGAP1Q96PV0 1343 aa26.47■■□□□ 1.83
DDX41-202ENST00000503078 PHF2O75151 1096 aa26.47■■□□□ 1.83
DDX41-202ENST00000503078 KRT13P13646 458 aa26.47■■□□□ 1.83
DDX41-202ENST00000503078 HADHBP55084 474 aaKnown RBP26.47■■□□□ 1.83
DDX41-202ENST00000503078 NFIAQ12857 509 aa26.47■■□□□ 1.83
DDX41-202ENST00000503078 CTTNQ14247 550 aaKnown RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms