RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 WNT16Q9UBV4 365 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 PNMA2Q9UL42 364 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 USTQ9Y2C2 406 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 MRPL11Q9Y3B7 192 aaKnown RBP5.81□□□□□ -1.48
HTT-202ENST00000502820 TELO2Q9Y4R8 837 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 PCDHA1Q9Y5I3 950 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 MYH8P13535 1937 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 FAM186AA6NE01 2351 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 ABCB11O95342 1321 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 C2orf71A6NGG8 1288 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 FAM170BA6NMN3 283 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 B4E1Z4 1266 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 C2CD2LO14523 706 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 SLC30A4O14863 429 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 CD2BP2O95400 341 aaKnown RBP5.8□□□□□ -1.48
HTT-202ENST00000502820 CCND2P30279 289 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 TCF7P36402 384 aaPredicted RBP5.8□□□□□ -1.48
HTT-202ENST00000502820 SARSP49591 514 aaKnown RBP5.8□□□□□ -1.48
HTT-202ENST00000502820 MGAT3Q09327 533 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 LETM2Q2VYF4 491 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 LONRF3Q496Y0 759 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 GET4Q7L5D6 327 aaPredicted RBP5.8□□□□□ -1.48
HTT-202ENST00000502820 TRMT1LQ7Z2T5 733 aaKnown RBP5.8□□□□□ -1.48
HTT-202ENST00000502820 MAML2Q8IZL2 1156 aaPredicted RBP5.8□□□□□ -1.48
HTT-202ENST00000502820 VPS52Q8N1B4 723 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 ENAHQ8N8S7 591 aaPredicted RBP5.8□□□□□ -1.48
HTT-202ENST00000502820 C12orf50Q8NA57 414 aaPredicted RBP5.8□□□□□ -1.48
HTT-202ENST00000502820 PJA1Q8NG27 643 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 IL31RAQ8NI17 732 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 RASGRP4Q8TDF6 673 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 ESR2Q92731 530 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 ARID3AQ99856 593 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 ZKSCAN3Q9BRR0 538 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 FAM107BQ9H098 131 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 GBP3Q9H0R5 595 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 RASSF4Q9H2L5 321 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 DZANK1Q9NVP4 752 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 PSD3Q9NYI0 1048 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 ZSWIM5Q9P217 1185 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 IGSF9Q9P2J2 1179 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 PCDHGA2Q9Y5H1 932 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 TRPV2Q9Y5S1 764 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 MYO7AQ13402 2215 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 CACNA1HO95180 2353 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 TRIP12Q14669 1992 aaPredicted RBP5.8□□□□□ -1.48
HTT-202ENST00000502820 SCN10AQ9Y5Y9 1956 aa5.8□□□□□ -1.48
HTT-202ENST00000502820 WDR19Q8NEZ3 1342 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 KMT2BQ9UMN6 2715 aaPredicted RBP5.79□□□□□ -1.48
HTT-202ENST00000502820 SGSM2O43147 1006 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 MGEA5O60502 916 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 RPS6KA5O75582 802 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 IVLP07476 585 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 SRFP11831 508 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 BRD2P25440 801 aaKnown RBP5.79□□□□□ -1.48
HTT-202ENST00000502820 U2AF2P26368 475 aaKnown RBP eCLIP5.79□□□□□ -1.48
HTT-202ENST00000502820 CHMLP26374 656 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 TNNT3P45378 269 aaPredicted RBP5.79□□□□□ -1.48
HTT-202ENST00000502820 ALDH7A1P49419 539 aaKnown RBP5.79□□□□□ -1.48
HTT-202ENST00000502820 GSDMDP57764 484 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 KRT76Q01546 638 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 PLCB3Q01970 1234 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 NEDD9Q14511 834 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 PGM5Q15124 567 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 SEC23AQ15436 765 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 IMMTQ16891 758 aaKnown RBP5.79□□□□□ -1.48
HTT-202ENST00000502820 QRICH1Q2TAL8 776 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 GNPTABQ3T906 1256 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 GPATCH4Q5T3I0 446 aaKnown RBP5.79□□□□□ -1.48
HTT-202ENST00000502820 JAKMIP3Q5VZ66 844 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 C19orf48Q6RUI8 117 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 SARM1Q6SZW1 724 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 PRR23CQ6ZRP0 262 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 FILIP1Q7Z7B0 1213 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 IQCA1Q86XH1 822 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 HOMER1Q86YM7 354 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 ADGRF4Q8IZF3 695 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 CEP120Q8N960 986 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 PNMA1Q8ND90 353 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 RGS22Q8NE09 1264 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 TRAPPC12Q8WVT3 735 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 DDX1Q92499 740 aaKnown RBP5.79□□□□□ -1.48
HTT-202ENST00000502820 TMEM169Q96HH4 297 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 SHDQ96IW2 340 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 ZSCAN10Q96SZ4 725 aaPredicted RBP5.79□□□□□ -1.48
HTT-202ENST00000502820 PDCD2LQ9BRP1 358 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 MYL10Q9BUA6 226 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 CELF4Q9BZC1 486 aaKnown RBP5.79□□□□□ -1.48
HTT-202ENST00000502820 TMX1Q9H3N1 280 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 CWH43Q9H720 699 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 CNNM2Q9H8M5 875 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 SFXN1Q9H9B4 322 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 SEMA4GQ9NTN9 838 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 DDX19AQ9NUU7 478 aaKnown RBP5.79□□□□□ -1.48
HTT-202ENST00000502820 ZSCAN32Q9NX65 697 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 LZTS1Q9Y250 596 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 MTF2Q9Y483 593 aaPredicted RBP5.79□□□□□ -1.48
HTT-202ENST00000502820 TAF6LQ9Y6J9 622 aa5.79□□□□□ -1.48
HTT-202ENST00000502820 CCDC195A0A1B0GUA6 201 aa5.78□□□□□ -1.48
HTT-202ENST00000502820 KANSL1LA0AUZ9 987 aa5.78□□□□□ -1.48
HTT-202ENST00000502820 TBC1D4O60343 1298 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms