RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 ZNF618Q5T7W0 954 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 SH3RF1Q7Z6J0 888 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 KSR1Q8IVT5 923 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 TDHQ8IZJ6 230 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 ASAP3Q8TDY4 903 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 DHX38Q92620 1227 aaKnown RBP12.66□□□□□ -0.38
CTTN-208ENST00000498223 WNT8BQ93098 351 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 LRCH3Q96II8 777 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 CTAGE1Q96RT6 745 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 UBE2OQ9C0C9 1292 aaKnown RBP12.66□□□□□ -0.38
CTTN-208ENST00000498223 PANK4Q9NVE7 773 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 LARSQ9P2J5 1176 aaKnown RBP12.66□□□□□ -0.38
CTTN-208ENST00000498223 TRPV2Q9Y5S1 764 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 CDY2AQ9Y6F7 541 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 CAND2O75155 1236 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 SMC2O95347 1197 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 SELPP16109 830 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 GAP43P17677 238 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 GLRA2P23416 452 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 CYP2C18P33260 490 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 ARL2P36404 184 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 PHKA2P46019 1235 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 SMTNP53814 917 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 CCL23P55773 120 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 PNOCQ13519 176 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 CUL4BQ13620 913 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 POSTNQ15063 836 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 ODR4Q5SWX8 454 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 GPR153Q6NV75 609 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 LRRC8DQ7L1W4 858 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 ZBTB8OSQ8IWT0 167 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 LINC01465Q8N7H1 131 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 RNF149Q8NC42 400 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 DEPTORQ8TB45 409 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 C7orf25Q9BPX7 421 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 NOC4LQ9BVI4 516 aaKnown RBP12.65□□□□□ -0.38
CTTN-208ENST00000498223 CELF4Q9BZC1 486 aaKnown RBP12.65□□□□□ -0.38
CTTN-208ENST00000498223 GCOM2Q9BZD3 368 aaPredicted RBP12.65□□□□□ -0.38
CTTN-208ENST00000498223 TRIM9Q9C026 710 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 NUP62CLQ9H1M0 184 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 PARVGQ9HBI0 331 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 KMT5AQ9NQR1 393 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 TBC1D7Q9P0N9 293 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 KCNG1Q9UIX4 513 aa12.65□□□□□ -0.38
CTTN-208ENST00000498223 TET1Q8NFU7 2136 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 A0A087WZ62 844 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 SLC16A4O15374 487 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 RPN1P04843 607 aaKnown RBP12.64□□□□□ -0.39
CTTN-208ENST00000498223 MYL1P05976 194 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 PLS3P13797 630 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 GPC3P51654 580 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 MAPK7Q13164 816 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 TRIM71Q2Q1W2 868 aaKnown RBP12.64□□□□□ -0.39
CTTN-208ENST00000498223 HERC4Q5GLZ8 1057 aaPredicted RBP12.64□□□□□ -0.39
CTTN-208ENST00000498223 RPAINQ86UA6 219 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 SFR1Q86XK3 245 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 FAM178BQ8IXR5 827 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 ZNF710Q8N1W2 664 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 GPT2Q8TD30 523 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 SMARCE1Q969G3 411 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 DNAJC19Q96DA6 116 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 OSMRQ99650 979 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 FDXACB1Q9BRP7 624 aaPredicted RBP12.64□□□□□ -0.39
CTTN-208ENST00000498223 INO80BQ9C086 356 aaPredicted RBP12.64□□□□□ -0.39
CTTN-208ENST00000498223 MRPL44Q9H9J2 332 aaKnown RBP12.64□□□□□ -0.39
CTTN-208ENST00000498223 C17orf75Q9HAS0 396 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 EXOC1Q9NV70 894 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 TBX21Q9UL17 535 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 LTBP2Q14767 1821 aa12.64□□□□□ -0.39
CTTN-208ENST00000498223 UMODL1Q5DID0 1318 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 TRIM43BA6NCK2 446 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 INO80B-WBP1J3KQ70 363 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 K7ENM7 598 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 PITPNM1O00562 1244 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 KIAA0355O15063 1070 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 TRAK2O60296 914 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 TIMP1P01033 207 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 CHRNA1P02708 482 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 NAMPTP43490 491 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 NPTX2P47972 431 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 CRYBB1P53674 252 aaPredicted RBP12.63□□□□□ -0.39
CTTN-208ENST00000498223 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
CTTN-208ENST00000498223 COASYQ13057 564 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 CAPSQ13938 189 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 NFKBIBQ15653 356 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 TMEM132AQ24JP5 1023 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 UNC13DQ70J99 1090 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 ZNF410Q86VK4 478 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 DAW1Q8N136 415 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 TMEM199Q8N511 208 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 BSNDQ8WZ55 320 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 ERCC4Q92889 916 aaPredicted RBP12.63□□□□□ -0.39
CTTN-208ENST00000498223 TRIM43Q96BQ3 446 aaPredicted RBP12.63□□□□□ -0.39
CTTN-208ENST00000498223 SCLYQ96I15 445 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 LBHD1Q9BQE6 289 aaPredicted RBP12.63□□□□□ -0.39
CTTN-208ENST00000498223 C2orf40Q9H1Z8 148 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 CLSTN2Q9H4D0 955 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 CDHR5Q9HBB8 845 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 SEL1LQ9UBV2 794 aa12.63□□□□□ -0.39
CTTN-208ENST00000498223 MICAL3Q7RTP6 2002 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms