RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 IDEP14735 1019 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 NPTX2P47972 431 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 GPC3P51654 580 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 CLCN3P51790 818 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 CRYBB1P53674 252 aaPredicted RBP21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 CHMP4BP1P59074 171 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 PTENP60484 403 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 ZNF200P98182 395 aaPredicted RBP21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 ZNF720Q7Z2F6 126 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 GRAMD1CQ8IYS0 662 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 TNS4Q8IZW8 715 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 LRRC71Q8N4P6 559 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 MYCT1Q8N699 235 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 ANP32EQ9BTT0 268 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 STRA6Q9BX79 667 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 BLZF1Q9H2G9 400 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 ADAMTS10Q9H324 1103 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 TRMT13Q9NUP7 481 aaKnown RBP21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 PCDHB13Q9Y5F0 798 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 UBE4BO95155 1302 aa21.8■■□□□ 1.08
SCAMP3-209ENST00000497470 EVPLQ92817 2033 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 M0QZ92 97 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 GPR32O75388 356 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 PRR29P0C7W0 189 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 MRPS6P82932 125 aaKnown RBP21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 GTF2BQ00403 316 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 DRP2Q13474 957 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 FAM187BQ17R55 369 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 KMT5BQ4FZB7 885 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 FAM26FQ5R3K3 315 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 FOXR2Q6PJQ5 311 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 RUFY4Q6ZNE9 571 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 FAM178BQ8IXR5 827 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 DNAJB3Q8WWF6 145 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 HTATIP2Q9BUP3 242 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 GPRC5CQ9NQ84 441 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 AKT3Q9Y243 479 aa21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 TRIP12Q14669 1992 aaPredicted RBP21.79■■□□□ 1.08
SCAMP3-209ENST00000497470 NPHP3-ACAD11A0A0J9YXS1 232 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 RSPH10B2B2RC85 870 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 PPP1R37O75864 691 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 RSPH10BP0C881 870 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 PHKA2P46019 1235 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 TLE2Q04725 743 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 FAAP100Q0VG06 881 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 CAPSQ13938 189 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 MORC3Q14149 939 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 CAMK4Q16566 473 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 ZNF658Q5TYW1 1059 aaPredicted RBP21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 CAVIN1Q6NZI2 390 aaKnown RBP21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 RHPN2Q8IUC4 686 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 ASAP3Q8TDY4 903 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 DHX38Q92620 1227 aaKnown RBP21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 PRIMPOLQ96LW4 560 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 CELF4Q9BZC1 486 aaKnown RBP21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 TRPV6Q9H1D0 765 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 IFT122Q9HBG6 1241 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 KMT5AQ9NQR1 393 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 TBX21Q9UL17 535 aa21.78■■□□□ 1.08
SCAMP3-209ENST00000497470 PEX3P56589 373 aa21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 SNRPFP62306 86 aaKnown RBP21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 MGAT3Q09327 533 aa21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 BMT2Q1RMZ1 405 aa21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 LRRC26Q2I0M4 334 aa21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 TRIM60Q495X7 471 aa21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 PPP4R3CPQ6ZMV5 832 aa21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 EPM2AIP1Q7L775 607 aaPredicted RBP21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 SFR1Q86XK3 245 aa21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 ZBTB8OSQ8IWT0 167 aa21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 RNF149Q8NC42 400 aa21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 TMEM161BQ8NDZ6 487 aa21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 BSNDQ8WZ55 320 aa21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 GCOM2Q9BZD3 368 aaPredicted RBP21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 TRPV2Q9Y5S1 764 aa21.77■■□□□ 1.08
SCAMP3-209ENST00000497470 MYH11P35749 1972 aa21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 KIAA0355O15063 1070 aa21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 CLTBP09497 229 aa21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 CKBP12277 381 aa21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 EIF4BP23588 611 aaKnown RBP21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 ATN1P54259 1190 aaPredicted RBP21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 NLRP11P59045 1033 aaKnown RBP21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 RAD51AP2Q09MP3 1159 aa21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 MAEAQ7L5Y9 396 aa21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 HAUS6Q7Z4H7 955 aa21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 GUF1Q8N442 669 aaKnown RBP21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 MLKLQ8NB16 471 aa21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 DEPTORQ8TB45 409 aa21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 ZNF507Q8TCN5 953 aa21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 TMEM174Q8WUU8 243 aa21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 FZD8Q9H461 694 aa21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 CGNQ9P2M7 1197 aaKnown RBP21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 MAN1B1Q9UKM7 699 aa21.76■■□□□ 1.07
SCAMP3-209ENST00000497470 SFI1A8K8P3 1242 aa21.75■■□□□ 1.07
SCAMP3-209ENST00000497470 DARSP14868 501 aaKnown RBP21.75■■□□□ 1.07
SCAMP3-209ENST00000497470 SELPP16109 830 aa21.75■■□□□ 1.07
SCAMP3-209ENST00000497470 CASP1P29466 404 aa21.75■■□□□ 1.07
SCAMP3-209ENST00000497470 NOC4LQ9BVI4 516 aaKnown RBP21.75■■□□□ 1.07
SCAMP3-209ENST00000497470 FAM49AQ9H0Q0 323 aaPredicted RBP21.75■■□□□ 1.07
SCAMP3-209ENST00000497470 TMEM206Q9H813 350 aa21.75■■□□□ 1.07
SCAMP3-209ENST00000497470 MRPL44Q9H9J2 332 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms