RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 NLRP7Q8WX94 980 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 RAD9AQ99638 391 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 ZBED2Q9BTP6 218 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 SLC28A3Q9HAS3 691 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 CDHR5Q9HBB8 845 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 ATP6V0A4Q9HBG4 840 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 NOC2LQ9Y3T9 749 aaKnown RBP12.76□□□□□ -0.37
HLA-B-254ENST00000497377 COL4A3BPQ9Y5P4 624 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 MORC2Q9Y6X9 1032 aaPredicted RBP12.76□□□□□ -0.37
HLA-B-254ENST00000497377 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.75□□□□□ -0.37
HLA-B-254ENST00000497377 ARHGEF35A5YM69 484 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 VWA3AA6NCI4 1184 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 ENPP3O14638 875 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 LONP1P36776 959 aaKnown RBP12.75□□□□□ -0.37
HLA-B-254ENST00000497377 RABGGTBP53611 331 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 TTC3P53804 2025 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 POU5F1BQ06416 359 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 NFX1Q12986 1120 aaKnown RBP12.75□□□□□ -0.37
HLA-B-254ENST00000497377 HYIQ5T013 277 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 FAM228AQ86W67 206 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 RHPN2Q8IUC4 686 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 TOP1MTQ969P6 601 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 PPP1R16BQ96T49 567 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 NT5C3AQ9H0P0 336 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 C1orf112Q9NSG2 853 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 ST3GAL5Q9UNP4 418 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 DNM3Q9UQ16 869 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 INSL6Q9Y581 213 aa12.75□□□□□ -0.37
HLA-B-254ENST00000497377 SZT2Q5T011 3432 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 A0A087WZ62 844 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 STAG3L1P0CL83 205 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 ZSCAN22P10073 491 aaPredicted RBP12.74□□□□□ -0.37
HLA-B-254ENST00000497377 SFPQP23246 707 aaKnown RBP eCLIP12.74□□□□□ -0.37
HLA-B-254ENST00000497377 HTRA4P83105 476 aaPredicted RBP12.74□□□□□ -0.37
HLA-B-254ENST00000497377 LAMTOR4Q0VGL1 99 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 TFDP1Q14186 410 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 PCBP1Q15365 356 aaKnown RBP eCLIP12.74□□□□□ -0.37
HLA-B-254ENST00000497377 SRGAP1Q7Z6B7 1085 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 PRPF31Q8WWY3 499 aaKnown RBP12.74□□□□□ -0.37
HLA-B-254ENST00000497377 TMEM143Q96AN5 459 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 NLRP4Q96MN2 994 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 ZNF396Q96N95 335 aaPredicted RBP12.74□□□□□ -0.37
HLA-B-254ENST00000497377 FDXACB1Q9BRP7 624 aaPredicted RBP12.74□□□□□ -0.37
HLA-B-254ENST00000497377 NKX2-4Q9H2Z4 354 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 TMX1Q9H3N1 280 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 SEMA6BQ9H3T3 888 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 ZNF576Q9H609 170 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 XPNPEP1Q9NQW7 623 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 DDX19AQ9NUU7 478 aaKnown RBP12.74□□□□□ -0.37
HLA-B-254ENST00000497377 MTMR10Q9NXD2 777 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 KIAA1024Q9UPX6 916 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 YBX2Q9Y2T7 364 aaKnown RBP12.74□□□□□ -0.37
HLA-B-254ENST00000497377 MYH15Q9Y2K3 1946 aa12.74□□□□□ -0.37
HLA-B-254ENST00000497377 COL4A6Q14031 1691 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 DENND3A2RUS2 1198 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 PP2D1A8MPX8 630 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
HLA-B-254ENST00000497377 EYA4O95677 639 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 ZSCAN20P17040 1043 aaPredicted RBP12.73□□□□□ -0.37
HLA-B-254ENST00000497377 CYP11B2P19099 503 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 ARL2P36404 184 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 PHKA2P46019 1235 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 PTPAQ15257 358 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 ECM1Q16610 540 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 PPP2R2DQ66LE6 453 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 ATL3Q6DD88 541 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 PADI6Q6TGC4 694 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 SLC24A5Q71RS6 500 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 NPAS4Q8IUM7 802 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 CDK5RAP3Q96JB5 506 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 YME1L1Q96TA2 773 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 ADAM2Q99965 735 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 MMTAG2Q9BU76 263 aaKnown RBP12.73□□□□□ -0.37
HLA-B-254ENST00000497377 TTYH1Q9H313 450 aaPredicted RBP12.73□□□□□ -0.37
HLA-B-254ENST00000497377 CHST12Q9NRB3 414 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 RGS18Q9NS28 235 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 CLIC4Q9Y696 253 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 CHD9Q3L8U1 2897 aa12.73□□□□□ -0.37
HLA-B-254ENST00000497377 CA3P07451 260 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 MYOGP15173 224 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 CDC25AP30304 524 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 UBA7P41226 1012 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 SARSP49591 514 aaKnown RBP12.72□□□□□ -0.37
HLA-B-254ENST00000497377 DSC3Q14574 896 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 Q7L0L9 218 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 RTN4RL1Q86UN2 441 aaPredicted RBP12.72□□□□□ -0.37
HLA-B-254ENST00000497377 CABP7Q86V35 215 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 RNF149Q8NC42 400 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 LINC01599Q8WXQ3 324 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 CALML4Q96GE6 196 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 ZNF668Q96K58 619 aaPredicted RBP12.72□□□□□ -0.37
HLA-B-254ENST00000497377 USP28Q96RU2 1077 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 TIPINQ9BVW5 301 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 NFKBIZQ9BYH8 718 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 BHMT2Q9H2M3 363 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 IFT122Q9HBG6 1241 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 DACT1Q9NYF0 836 aa12.72□□□□□ -0.37
HLA-B-254ENST00000497377 SRPRBQ9Y5M8 271 aaKnown RBP12.72□□□□□ -0.37
HLA-B-254ENST00000497377 A0A087WWV3 80 aa12.71□□□□□ -0.37
HLA-B-254ENST00000497377 C9IYK1 514 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms