RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 PCNX4Q63HM2 1172 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 POTEGQ6S5H5 508 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 HOMER1Q86YM7 354 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 KIAA0319LQ8IZA0 1049 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 SRBD1Q8N5C6 995 aaKnown RBP11.15□□□□□ -0.62
SRSF4-205ENST00000497015 AUTS2Q8WXX7 1259 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 RUBCNQ92622 972 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 GLG1Q92896 1179 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 BRF1Q92994 677 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 ZNF274Q96GC6 653 aaPredicted RBP11.15□□□□□ -0.62
SRSF4-205ENST00000497015 MYL10Q9BUA6 226 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 SMARCAD1Q9H4L7 1026 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 PUF60Q9UHX1 559 aaKnown RBP11.15□□□□□ -0.62
SRSF4-205ENST00000497015 DBR1Q9UK59 544 aaKnown RBP11.15□□□□□ -0.62
SRSF4-205ENST00000497015 ST3GAL5Q9UNP4 418 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 LOXHD1Q8IVV2 1947 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 TPRP12270 2363 aaKnown RBP11.14□□□□□ -0.63
SRSF4-205ENST00000497015 OTOGLQ3ZCN5 2332 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 CEP250Q9BV73 2442 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 SMIM35A0A1B0GVV1 85 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 RRN3P2A6NIE6 340 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 GOLGA8AA7E2F4 631 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 GOLGA8BA8MQT2 603 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 NT5C1B-RDH14C9J2C7 533 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 CXCL14O95715 111 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 DCNP07585 359 aaKnown RBP11.14□□□□□ -0.63
SRSF4-205ENST00000497015 GLULP15104 373 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 TGM1P22735 817 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 METAP2P50579 478 aaKnown RBP eCLIP11.14□□□□□ -0.63
SRSF4-205ENST00000497015 MTHFD1LQ6UB35 978 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 TMC5Q6UXY8 1006 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 SLC39A11Q8N1S5 342 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 TCEANC2Q96MN5 208 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 REPIN1Q9BWE0 567 aaKnown RBP11.14□□□□□ -0.63
SRSF4-205ENST00000497015 TMEM161AQ9NX61 479 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 BRPF3Q9ULD4 1205 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 KAT6AQ92794 2004 aa11.14□□□□□ -0.63
SRSF4-205ENST00000497015 CNTNAP5Q8WYK1 1306 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 DCDC2BA2VCK2 349 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 PIK3CDO00329 1044 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 RPS6KA5O75582 802 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 PLEKHA8P1O95397 391 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 CFHP08603 1231 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 TOB2Q14106 344 aaPredicted RBP11.13□□□□□ -0.63
SRSF4-205ENST00000497015 SMC1AQ14683 1233 aaKnown RBP11.13□□□□□ -0.63
SRSF4-205ENST00000497015 ST3GAL2Q16842 350 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 PPP1R18Q6NYC8 613 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 FAM228AQ86W67 206 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 TMEM173Q86WV6 379 aaPredicted RBP11.13□□□□□ -0.63
SRSF4-205ENST00000497015 FAM177A1Q8N128 213 aaPredicted RBP11.13□□□□□ -0.63
SRSF4-205ENST00000497015 NME8Q8N427 588 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 TMEM117Q9H0C3 514 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 GLT8D2Q9H1C3 349 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 ELAC1Q9H777 363 aaKnown RBP11.13□□□□□ -0.63
SRSF4-205ENST00000497015 ATP6V0A4Q9HBG4 840 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 C1orf112Q9NSG2 853 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 PDRG1Q9NUG6 133 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 SPG21Q9NZD8 308 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 PKD2L1Q9P0L9 805 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 WNT16Q9UBV4 365 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 UBIAD1Q9Y5Z9 338 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 CACNA1GO43497 2377 aa11.13□□□□□ -0.63
SRSF4-205ENST00000497015 ACACBO00763 2458 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 LRRN2O75325 713 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 CPA1P15085 419 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 KLRC1P26715 233 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 KRT17Q04695 432 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 FUT2Q10981 343 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 CLLU1OSQ5K130 101 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 SPECC1Q5M775 1068 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 GPR149Q86SP6 731 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 C1orf210Q8IVY1 113 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 SLC44A3Q8N4M1 653 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 GPRASP2Q96D09 838 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 ZNF558Q96NG5 402 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 HINFPQ9BQA5 517 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
SRSF4-205ENST00000497015 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
SRSF4-205ENST00000497015 FBXL21Q9UKT6 434 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 GINS2Q9Y248 185 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 GPR179Q6PRD1 2367 aa11.12□□□□□ -0.63
SRSF4-205ENST00000497015 CHD6Q8TD26 2715 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 DENND3A2RUS2 1198 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 ZBTB42B2RXF5 422 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 M0QZ92 97 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 GPR32O75388 356 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 SEC24BO95487 1268 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 IFNAR1P17181 557 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 RXRAP19793 462 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 PDIA3P30101 505 aaKnown RBP11.11□□□□□ -0.63
SRSF4-205ENST00000497015 RBM25P49756 843 aaKnown RBP11.11□□□□□ -0.63
SRSF4-205ENST00000497015 TBC1D8BQ0IIM8 1120 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 CPLX2Q6PUV4 134 aaKnown RBP11.11□□□□□ -0.63
SRSF4-205ENST00000497015 NLRX1Q86UT6 975 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 GIMAP8Q8ND71 665 aaPredicted RBP11.11□□□□□ -0.63
SRSF4-205ENST00000497015 BCL7CQ8WUZ0 217 aaPredicted RBP11.11□□□□□ -0.63
SRSF4-205ENST00000497015 PIBF1Q8WXW3 757 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 CUL5Q93034 780 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 PPP1R16BQ96T49 567 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 VN1R3Q9BXE9 311 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms