RNA–Protein interactions for RNA: ENST00000496744.5

ECM1-206, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-206ENST00000496744 TTC38Q5R3I4 469 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 FERMT3Q86UX7 667 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 ECHDC2Q86YB7 292 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 EXOC8Q8IYI6 725 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 SPPL3Q8TCT6 385 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 NEK9Q8TD19 979 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 P2RX5Q93086 422 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 HLA-CQ95604 372 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 NLRP4Q96MN2 994 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 SCLT1Q96NL6 688 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 CASD1Q96PB1 797 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 C11orf84Q9BUA3 381 aaPredicted RBP12.18□□□□□ -0.46
ECM1-206ENST00000496744 TRAIPQ9BWF2 469 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 MINDY3Q9H8M7 445 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 ATP6V0A4Q9HBG4 840 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 ALG13Q9NP73 1137 aaKnown RBP12.18□□□□□ -0.46
ECM1-206ENST00000496744 CHST12Q9NRB3 414 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
ECM1-206ENST00000496744 COG5Q9UP83 839 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 COL4A3BPQ9Y5P4 624 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 FNDC1Q4ZHG4 1894 aaPredicted RBP12.17□□□□□ -0.46
ECM1-206ENST00000496744 TBKBP1A7MCY6 615 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 MED24O75448 989 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 ITGB1P05556 798 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 OR52Z1P0C646 297 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 HOXA11P31270 313 aaPredicted RBP12.17□□□□□ -0.46
ECM1-206ENST00000496744 RARRES1P49788 294 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 KCNQ1P51787 676 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 NAALADL2Q58DX5 795 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 TCEAL5Q5H9L2 206 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 CLLU1OSQ5K130 101 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 KLHL23Q8NBE8 558 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 PIGOQ8TEQ8 1089 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 PSPC1Q8WXF1 523 aaKnown RBP12.17□□□□□ -0.46
ECM1-206ENST00000496744 SYMPKQ92797 1274 aaKnown RBP12.17□□□□□ -0.46
ECM1-206ENST00000496744 POLR3CQ9BUI4 534 aaPredicted RBP12.17□□□□□ -0.46
ECM1-206ENST00000496744 BACH2Q9BYV9 841 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 INO80BQ9C086 356 aaPredicted RBP12.17□□□□□ -0.46
ECM1-206ENST00000496744 CWH43Q9H720 699 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 TYW1Q9NV66 732 aaKnown RBP12.17□□□□□ -0.46
ECM1-206ENST00000496744 RNF216Q9NWF9 866 aaPredicted RBP12.17□□□□□ -0.46
ECM1-206ENST00000496744 PCDHB6Q9Y5E3 794 aa12.17□□□□□ -0.46
ECM1-206ENST00000496744 ASAP2O43150 1006 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 GAS2O43903 313 aaKnown RBP12.16□□□□□ -0.46
ECM1-206ENST00000496744 DGAT1O75907 488 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 EOMESO95936 686 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 SRGAP2CP0DJJ0 459 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 SFPQP23246 707 aaKnown RBP eCLIP12.16□□□□□ -0.46
ECM1-206ENST00000496744 GJB2P29033 226 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 ARL2P36404 184 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 PHKA2P46019 1235 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 MCM2P49736 904 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.46
ECM1-206ENST00000496744 IL17AQ16552 155 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 ECM1Q16610 540 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 ASAP3Q8TDY4 903 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 TCP11Q8WWU5 503 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 MTRQ99707 1265 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 TMEM117Q9H0C3 514 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 LMAN2LQ9H0V9 348 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 TUFT1Q9NNX1 390 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 DACT1Q9NYF0 836 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 KIAA1671Q9BY89 1806 aa12.16□□□□□ -0.46
ECM1-206ENST00000496744 ZNF623O75123 536 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 RPA1P27694 616 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 IRS1P35568 1242 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 PTENP60484 403 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 POU5F1BQ06416 359 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 PTGDRQ13258 359 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 GNL2Q13823 731 aaKnown RBP12.15□□□□□ -0.46
ECM1-206ENST00000496744 AAK1Q2M2I8 961 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 TIGD5Q53EQ6 642 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 POTEGQ6S5H5 508 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 CATSPER4Q7RTX7 472 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 SRGAP1Q7Z6B7 1085 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 IFNLR1Q8IU57 520 aaPredicted RBP12.15□□□□□ -0.46
ECM1-206ENST00000496744 RNF149Q8NC42 400 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 ADAMTS19Q8TE59 1207 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 NSUN3Q9H649 340 aaKnown RBP12.15□□□□□ -0.46
ECM1-206ENST00000496744 UBE2ZQ9H832 354 aaPredicted RBP12.15□□□□□ -0.46
ECM1-206ENST00000496744 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.15□□□□□ -0.46
ECM1-206ENST00000496744 AGPAT5Q9NUQ2 364 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 DBR1Q9UK59 544 aaKnown RBP12.15□□□□□ -0.46
ECM1-206ENST00000496744 NOL7Q9UMY1 257 aaKnown RBP12.15□□□□□ -0.46
ECM1-206ENST00000496744 PIN4Q9Y237 131 aaKnown RBP12.15□□□□□ -0.46
ECM1-206ENST00000496744 ATG2AQ2TAZ0 1938 aa12.15□□□□□ -0.46
ECM1-206ENST00000496744 NCOR1O75376 2440 aa12.15□□□□□ -0.47
ECM1-206ENST00000496744 ARID2Q68CP9 1835 aa12.14□□□□□ -0.47
ECM1-206ENST00000496744 MEIS3P2A8K0S8 358 aa12.14□□□□□ -0.47
ECM1-206ENST00000496744 HOXA2O43364 376 aa12.14□□□□□ -0.47
ECM1-206ENST00000496744 GLRA2P23416 452 aa12.14□□□□□ -0.47
ECM1-206ENST00000496744 LTBRP36941 435 aa12.14□□□□□ -0.47
ECM1-206ENST00000496744 HYAL1Q12794 435 aa12.14□□□□□ -0.47
ECM1-206ENST00000496744 CUL4AQ13619 759 aa12.14□□□□□ -0.47
ECM1-206ENST00000496744 CAPSQ13938 189 aa12.14□□□□□ -0.47
ECM1-206ENST00000496744 PDIA5Q14554 519 aa12.14□□□□□ -0.47
ECM1-206ENST00000496744 MXD4Q14582 209 aaPredicted RBP12.14□□□□□ -0.47
ECM1-206ENST00000496744 AMHR2Q16671 573 aa12.14□□□□□ -0.47
ECM1-206ENST00000496744 CTC1Q2NKJ3 1217 aa12.14□□□□□ -0.47
ECM1-206ENST00000496744 UBXN11Q5T124 520 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms